NeurodataWithoutBorders / pynwb
A Python API for working with Neurodata stored in the NWB Format
☆194Updated this week
Alternatives and similar repositories for pynwb
Users that are interested in pynwb are comparing it to the libraries listed below
Sorting:
- Data format specification schema for the NWB neurophysiology data format☆57Updated this week
- Browser-based NWB visualization and DANDI exploration☆57Updated this week
- Elephant is the Electrophysiology Analysis Toolkit☆211Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated last month
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆88Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆122Updated 3 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆115Updated 8 months ago
- Tools to work with Allen Inst CCF data in matlab☆134Updated last year
- WIP: Python port of Kilosort2☆51Updated last year
- Fast and scalable spike sorting in python☆89Updated last year
- A Python interface to access neuroanatomical atlases☆147Updated last week
- Registration of cells across sessions.☆75Updated 8 months ago
- Tools for processing 2P recordings☆125Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆58Updated this week
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆101Updated 5 months ago
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Information about Neuropixels electrode arrays☆89Updated 5 months ago
- a visualization method for neural data☆222Updated last month
- cortex lab code for electrophysiology☆81Updated last year
- Visualization of electrophysiological data from Elephant☆23Updated 6 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆140Updated this week
- Functions to assess quality of spike sorting results☆33Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆62Updated last week
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated this week
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- ☆51Updated 8 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 2 months ago