NeurodataWithoutBorders / pynwb
A Python API for working with Neurodata stored in the NWB Format
☆189Updated this week
Alternatives and similar repositories for pynwb:
Users that are interested in pynwb are comparing it to the libraries listed below
- Data format specification schema for the NWB neurophysiology data format☆55Updated 2 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆86Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆113Updated 7 months ago
- Tools to work with Allen Inst CCF data in matlab☆130Updated last year
- Browser-based NWB visualization and DANDI exploration☆53Updated this week
- Tools for processing 2P recordings☆124Updated last year
- Registration of cells across sessions.☆73Updated 7 months ago
- GPU code for spike sorting☆181Updated last year
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆97Updated 3 months ago
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- A Python interface to access neuroanatomical atlases☆141Updated this week
- cortex lab code for electrophysiology☆79Updated last year
- Elephant is the Electrophysiology Analysis Toolkit☆206Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆118Updated last month
- a visualization method for neural data☆211Updated 5 months ago
- Fast and scalable spike sorting in python☆89Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆55Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- WIP: Python port of Kilosort2☆50Updated last year
- Information about Neuropixels electrode arrays☆86Updated 3 months ago
- GUI for spikeinterface objects☆33Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆133Updated this week
- Archived code for reading data saved by the Open Ephys GUI☆60Updated last year
- IBL core shared libraries☆62Updated this week
- MountainSort spike sorting algorithm, version 5☆43Updated 2 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆60Updated last week
- Lightweight electrophysiological data analysis library☆13Updated last month