A Python API for working with Neurodata stored in the NWB Format
☆224Sep 16, 2026Updated this week
Alternatives and similar repositories for pynwb
Users that are interested in pynwb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data format specification schema for the NWB neurophysiology data format☆67Aug 21, 2026Updated 3 weeks ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆81Updated this week
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆52Feb 23, 2026Updated 6 months ago
- Tool to help inspect NWB files for compliance with NWB Best Practices☆24Updated this week
- A Matlab interface for reading and writing NWB files☆62Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python-based module for creating flexible and robust spike sorting pipelines.☆847Updated this week
- Tutorials for learning NWB☆17Oct 3, 2022Updated 3 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆119Updated this week
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆363Aug 24, 2026Updated 3 weeks ago
- PYthon Neural Analysis Package☆380Updated this week
- code for reading and processing Allen Institute for Brain Science data☆398Jul 6, 2026Updated 2 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆25Nov 7, 2022Updated 3 years ago
- Elephant is the Electrophysiology Analysis Toolkit☆244Jun 21, 2026Updated 2 months ago
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆27Aug 28, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Relational Workflows: where database schemas define executable data pipelines.☆197Sep 9, 2026Updated last week
- Fast spike sorting with drift correction☆628Apr 27, 2026Updated 4 months ago
- IBL core shared libraries☆69Sep 7, 2026Updated last week
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆430Sep 12, 2026Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆130Aug 18, 2024Updated 2 years ago
- Interactive Python course for using the Neurodata Without Borders format☆15May 20, 2019Updated 7 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆81Sep 3, 2026Updated 2 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆154Aug 19, 2026Updated last month
- WIP: Python port of Kilosort2☆49Jul 8, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a visualization method for neural data☆256Apr 4, 2025Updated last year
- NWB GUIDE is a desktop app that provides a no-code user interface for converting neurophysiology data to NWB.☆26Aug 31, 2026Updated 2 weeks ago
- Metrics for spike sorting validation/quality control☆15Sep 8, 2021Updated 5 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆144Updated this week
- Web app for viewing results of ephys spike sorting☆29Sep 4, 2025Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆116Aug 25, 2026Updated 3 weeks ago
- A curated list of awesome Neuropixels resources.☆149Dec 16, 2025Updated 9 months ago
- GUI for spikeinterface objects☆71Sep 8, 2026Updated last week
- Functions to assess quality of spike sorting results☆36Sep 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- DANDI command line client to facilitate common operations☆28Updated this week
- Mesoscale activity ephys ingest schema☆11Jul 18, 2023Updated 3 years ago
- A Python package to visualise neuroanatomical data in atlas space☆670Sep 8, 2026Updated last week
- DataJoint pipeline for IBL project☆20Dec 15, 2022Updated 3 years ago
- Python package to handle probe layout, geometry and wiring to device.☆85Updated this week
- The Hierarchical Data Modeling Framework☆58Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆47Aug 20, 2026Updated 3 weeks ago