monarch-initiative / ontogptView external linksLinks
LLM-based ontological extraction tools, including SPIRES
☆796Feb 5, 2026Updated last week
Alternatives and similar repositories for ontogpt
Users that are interested in ontogpt are comparing it to the libraries listed below
Sorting:
- Ontology Access Kit: A python library and command line application for working with ontologies☆157Jun 5, 2025Updated 8 months ago
- LLM-driven curation assist tool☆100Oct 20, 2025Updated 3 months ago
- Linked Open Data Modeling Language☆459Updated this week
- Simple Standard for Sharing Ontology Mappings☆184Updated this week
- Ontology lifecycle management☆297Updated this week
- Data transformation framework for LinkML data models☆60Feb 9, 2026Updated last week
- Python toolkit for SSSOM mapping format☆60Feb 9, 2026Updated last week
- Schema and generated objects for biolink data model and upper ontology☆221Updated this week
- Bayesian OWL ontology merging☆32Jun 4, 2025Updated 8 months ago
- Integrated OBO ontology store☆48Updated this week
- Mondo Disease Ontology☆289Feb 9, 2026Updated last week
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated 10 months ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆115Updated this week
- Link Modeling Language (LinkML) model☆63Feb 4, 2026Updated last week
- Automated assistance for the schema development lifecycle☆55Dec 12, 2025Updated 2 months ago
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆49Feb 4, 2026Updated last week
- Utility for working with DOSDP design patterns and OWL ontologies☆28Dec 10, 2025Updated 2 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆26Sep 17, 2025Updated 4 months ago
- Mapping between LinkML schemas☆31Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Oct 8, 2025Updated 4 months ago
- Network Embedding All the Things☆18Oct 4, 2022Updated 3 years ago
- Materialize OWL existential relations☆20Nov 12, 2025Updated 3 months ago
- A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.☆27Oct 23, 2025Updated 3 months ago
- KGX is a Python library for exchanging Knowledge Graphs☆139Feb 5, 2026Updated last week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Mar 19, 2024Updated last year
- A knowledge extraction tool that uses a large language model to extract semantic information from text☆29Jan 3, 2023Updated 3 years ago
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆26Feb 21, 2025Updated 11 months ago
- A simple system for specifying OWL class design patterns for OBO-ish ontologies.☆47Dec 10, 2025Updated 2 months ago
- wrapper for multiple linkml storage engines