robert-haas / awesome-biomedical-knowledge-graphsLinks
A curated list of biomedical knowledge graphs and of resources for their construction.
☆72Updated last year
Alternatives and similar repositories for awesome-biomedical-knowledge-graphs
Users that are interested in awesome-biomedical-knowledge-graphs are comparing it to the libraries listed below
Sorting:
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆74Updated 5 months ago
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆26Updated 10 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆226Updated last year
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆77Updated 6 months ago
- Precision Medicine Knowledge Graph (PrimeKG)☆686Updated last year
- The Clinical Trials Knowledge Graph☆65Updated 2 years ago
- Code and data for TrialGPT.☆139Updated 11 months ago
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆120Updated 2 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆70Updated 7 months ago
- KGARevion: AI Agent for Knowledge-Intensive Biomedical QA☆40Updated 10 months ago
- ☆51Updated 9 months ago
- ☆22Updated last year
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆55Updated this week
- Code for CTO: A Large Clinical Trial Outcome and QA Dataset☆28Updated last week
- AIONER☆62Updated last year
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆577Updated 4 months ago
- Code and data for Cell-o1.☆27Updated 4 months ago
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆254Updated last year
- Electronic Health Record Analysis with Python.☆328Updated this week
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆33Updated 10 months ago
- ☆46Updated 2 years ago
- Vector Guideline Comparison for Medical Oncology☆38Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆31Updated last year
- Code repository to create the MIMIC-CDM Dataset.☆42Updated 11 months ago
- ☆67Updated 4 years ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆39Updated 5 months ago
- ☆32Updated 2 years ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆246Updated 7 months ago
- Build PharMeBINet from different sources.☆20Updated last month
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Updated last year