robert-haas / awesome-biomedical-knowledge-graphsLinks
A curated list of biomedical knowledge graphs and of resources for their construction.
☆63Updated 11 months ago
Alternatives and similar repositories for awesome-biomedical-knowledge-graphs
Users that are interested in awesome-biomedical-knowledge-graphs are comparing it to the libraries listed below
Sorting:
- Precision Medicine Knowledge Graph (PrimeKG)☆632Updated last year
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆71Updated last month
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆521Updated 3 weeks ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆208Updated last year
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆73Updated 3 months ago
- ☆18Updated last year
- ☆47Updated 5 months ago
- KGARevion: AI Agent for Knowledge-Intensive Biomedical QA☆37Updated 7 months ago
- The Clinical Trials Knowledge Graph☆61Updated 2 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆48Updated 3 weeks ago
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆112Updated last year
- AIONER☆60Updated last year
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆236Updated 4 months ago
- Code and data for TrialGPT.☆128Updated 8 months ago
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆227Updated last year
- Build PharMeBINet from different sources.☆19Updated last week
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆194Updated last year
- ☆31Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆64Updated 3 months ago
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆15Updated 6 months ago
- A unifying framework for biomedical research knowledge graphs☆268Updated 2 weeks ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- A curated list of awesome healthcare taxonomies and knowledge graphs.☆73Updated last year
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆90Updated 3 months ago
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Updated last year
- Vector Guideline Comparison for Medical Oncology☆36Updated last year
- Code and data for Cell-o1.☆24Updated 3 weeks ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆35Updated 2 months ago
- Backend library for conversational AI in biomedicine☆184Updated 2 months ago