Code and data for TrialGPT.
☆145Jan 24, 2025Updated last year
Alternatives and similar repositories for TrialGPT
Users that are interested in TrialGPT are comparing it to the libraries listed below
Sorting:
- Expert-Curated Oncology Reports to Advance Language Model Inference☆33Apr 17, 2024Updated last year
- ☆68Jan 5, 2022Updated 4 years ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆237Mar 24, 2024Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆75Mar 1, 2026Updated last week
- ☆20May 29, 2025Updated 9 months ago
- Code and data for Cell-o1.☆26Sep 19, 2025Updated 5 months ago
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆27Jan 2, 2026Updated 2 months ago
- Oncology Working Group Repository☆60Dec 31, 2025Updated 2 months ago
- ☆10Nov 7, 2022Updated 3 years ago
- ☆67Feb 27, 2021Updated 5 years ago
- Open source engine for matching cancer patients to precision medicine clinical trials (V2).☆38Dec 1, 2023Updated 2 years ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆98May 17, 2025Updated 9 months ago
- Findings of EMNLP'22 | Trial2Vec: Zero-Shot Clinical Trial Document Similarity Search using Self-Supervision☆25Apr 11, 2024Updated last year
- Official implementation of Panacea: A foundation model for clinical trial design, recruitment, search, and summarization.☆18Dec 24, 2024Updated last year
- ☆10Apr 21, 2025Updated 10 months ago
- A Python Natural Language Processing Toolkit for Electronic Health Record Texts☆13May 24, 2023Updated 2 years ago
- A light-weighted UMLS-based data augmentation for biomedical NLP tasks including Named Entity Recognition and sentence classification.☆10Apr 6, 2021Updated 4 years ago
- An intuitive platform for deploying the latest discoveries in healthcare AI to everybody's phones. Powered by PyTorch!☆10Aug 25, 2020Updated 5 years ago
- ☆25Jan 15, 2024Updated 2 years ago
- [EMNLP'24] EHRAgent: Code Empowers Large Language Models for Complex Tabular Reasoning on Electronic Health Records☆126Dec 26, 2024Updated last year
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆28Sep 6, 2024Updated last year
- MedEmbed is a collection of embedding models fine-tuned specifically for medical and clinical data.☆86Nov 16, 2025Updated 3 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆210Jun 6, 2025Updated 9 months ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆114Aug 22, 2024Updated last year
- Code for PromptNet☆16Jan 29, 2025Updated last year
- ☆12Oct 11, 2022Updated 3 years ago
- [EMNLP2024] Benchmark for "Large Language Models Are Poor Clinical Decision-Makers: A Comprehensive Benchmark"☆36Sep 18, 2025Updated 5 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆34Jan 2, 2024Updated 2 years ago
- ☆33Nov 30, 2023Updated 2 years ago
- Code for the paper "Automated Generation of Hospital Discharge Summaries Using Clinical Guidelines and Large Language Models"☆11May 3, 2024Updated last year
- Radiology Language Evaluations☆11Nov 17, 2023Updated 2 years ago
- [NeurIPS 2023] Official repository for "Distilling Out-of-Distribution Robustness from Vision-Language Foundation Models"☆11Jun 18, 2024Updated last year
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆32Jan 27, 2023Updated 3 years ago
- Parkar and Kim et al.'s paper on Can LLMs Select Important Instructions to Annotate?"☆13Jul 4, 2024Updated last year
- Library for converting clinical trial eligibility criteria to a machine-readable format.☆178Mar 22, 2022Updated 3 years ago
- This is the code repo for the paper AceSearcher: Bootstrapping Reasoning and Search for LLMs via Reinforced Self-Play (NeurIPS 2025 Spotl…☆25Sep 29, 2025Updated 5 months ago
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆83Jan 22, 2026Updated last month
- ☆42Apr 20, 2025Updated 10 months ago
- [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…☆41Jun 23, 2024Updated last year