Alternatives and similar repositories for HSDN

Users that are interested in HSDN are comparing it to the libraries listed below

• dhimmel / hsdn
  Analysis of the human symptoms–disease network
  ☆21Updated 8 years ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• zliendo / AI_MedicalNotes
  Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models
  ☆30Updated 6 years ago
• anantzoid / Medical-Diagnosis-Learning
  Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model
  ☆34Updated 7 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• clinicalml / HealthKnowledgeGraph
  Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
  ☆102Updated 4 years ago
• KHP-Informatics / ADR-graph
  Predicting adverse drug reactions from a knowledge graph
  ☆28Updated 4 years ago
• BarnesLab / Patient2Vec
  Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record
  ☆107Updated 6 years ago
• hscells / cui2vec
  Utility for cui2vec in Go
  ☆12Updated 2 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆69Updated 3 months ago
• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆37Updated 6 years ago
• elleros / DSHealth2019_loinc_embeddings
  Code and Word2Vec embeddings of LOINC codes for KDD 2019 DSHealth paper "Evaluation of Embeddings of Laboratory Test Codes for Patients a…
  ☆11Updated last year
• clinicalml / deepDiagnosis
  A torch package for learning diagnosis models from temporal patient data.
  ☆116Updated 7 years ago
• Yuqi92 / deep-patient-representation-mimiciii-multitask
  Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
  ☆32Updated 6 years ago
• MaharshSuryawala / Predict-Disease-From-Symptoms
  A Disease-Symptoms Network and a system that predicts diseases from symptoms using a decision tree classifier.
  ☆14Updated 4 years ago
• JHLiu7 / EarlyDRGPrediction
  ☆12Updated 2 years ago
• dbmi-pitt / public-PDDI-analysis
  migrates from swat-4-med-safety/SW-DDI-catalog/drug-drug-interactions
  ☆36Updated 7 years ago
• DeepPhe / DeepPhe-Release
  Public release of the DeepPhe analytic software
  ☆30Updated last week
• beamandrew / cui2vec
  ☆55Updated 5 years ago
• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆44Updated last year
• DATEXIS / UMLSParser
  Python module to parse UMLS source files
  ☆20Updated 2 years ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆83Updated this week
• XiangruiCAI / mce
  Source code for Medical Concept Embedding with Time-Aware Embedding
  ☆22Updated 5 years ago
• kbogas / medknow
  Medical Relations and Entities Extraction
  ☆37Updated 3 years ago
• blpercha / umls-to-graph
  Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
  ☆41Updated 4 years ago
• dermatologist / ckblib
  Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J
  ☆16Updated last year
• lasigeBioTM / BiOnt
  BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
  ☆26Updated last year
• gmichalo / UmlsBERT
  ☆99Updated 3 years ago
• dhimmel / disease-ontology
  User-friendly extensions to the Disease Ontology
  ☆20Updated 8 years ago