acadTags / Rare-disease-identificationLinks
Rare disease identification from free-text clinical notes with ontologies and weak supervision
☆32Updated 2 years ago
Alternatives and similar repositories for Rare-disease-identification
Users that are interested in Rare-disease-identification are comparing it to the libraries listed below
Sorting:
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated 2 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆101Updated 4 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 3 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- Medical Relations and Entities Extraction☆36Updated 3 years ago
- ☆98Updated 3 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated 2 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- ☆22Updated 3 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 3 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- ☆30Updated 4 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- ☆17Updated 4 years ago
- ☆67Updated 3 years ago
- Pre-training of Graph Augmented Transformers for Medication Recommendation☆121Updated 6 years ago
- PDD Graph : Bridging MIMIC-III and Linked Data Cloud☆37Updated 5 months ago
- ☆152Updated last year
- Source code for Medical Concept Embedding with Time-Aware Embedding☆22Updated 5 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 4 months ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- ☆25Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago