metabolomics-us / mona
MassBank of North America (MoNA) is a metadata-centric, auto-curating repository designed for efficient storage and querying of mass spectral records. The MoNA server is a set of Spring microservices written in Scala and Java utilizing MongoDB and ElasticSearch for data storage and RabbitMQ for messaging. The front-end is an Angular 10 web appli…
☆15Updated last year
Related projects ⓘ
Alternatives and complementary repositories for mona
- ☆25Updated 11 months ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 6 months ago
- Fiora is an in silico fragmentation algorithm for small compounds that produces simulated tandem mass spectra (MS/MS). The framework empl…☆24Updated 2 weeks ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated this week
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆22Updated last year
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- Tool for reliability assessment of omics peprocessing☆10Updated 8 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆18Updated 9 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year
- ☆18Updated last year
- Metabolome Annotation Workflow☆25Updated 7 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 3 years ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆39Updated last month
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆56Updated this week
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆28Updated 3 years ago
- ☆14Updated 6 months ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆19Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆29Updated 2 months ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 2 years ago
- ☆32Updated 4 months ago
- ☆22Updated last year
- Ms2 basEd saMple vectOrization (memo) package☆17Updated last year
- Parsers for chromatography data in R (HPLC-DAD/UV, GC-FID, MS)☆28Updated last month
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆19Updated 3 years ago
- Search spectral library with entropy similarity☆20Updated 6 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated 2 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆20Updated 2 weeks ago
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆27Updated 3 months ago
- Workflow for LC-MS feature analysis and spatial mapping☆19Updated 6 years ago