IBT-FMI / mouse-brain-templatesLinks
Generate a package-manager-friendly mouse brain atlases collection.
☆22Updated last year
Alternatives and similar repositories for mouse-brain-templates
Users that are interested in mouse-brain-templates are comparing it to the libraries listed below
Sorting:
- The ANTsX Ecosystem for Mapping the Mouse Brain☆12Updated this week
- precon_all surface pipline☆22Updated last week
- ☆13Updated 5 years ago
- Open resource exchange platform for non-human primate neuroimaging☆19Updated last month
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated 2 months ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Updated last year
- PNH segmentation pipelines based on nipype☆23Updated last week
- A Rat fMRI multi-center study☆33Updated 2 years ago
- Modern Neuroimaging Made Simple☆14Updated this week
- An open list of tools & resources for 'spikes': recordings of single-unit neural activity (action potentials).☆29Updated 2 years ago
- Processing tools for high-resolution neuroimaging☆71Updated 6 months ago
- Non-linear warps between common rhesus macaque brain templates☆26Updated last year
- Automated 3D brain registration with support for multiple species and atlases.☆134Updated last week
- Open-source eddy-current and head-motion correction for dMRI.☆17Updated 4 months ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆16Updated last year
- Stand alone fMRI software suite for layer-fMRI analyses.☆92Updated 2 weeks ago
- a standalone fork of nipy/nibabel#656☆31Updated this week
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆40Updated 3 weeks ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 7 months ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 4 years ago
- A Python implementation of 'dual-coding'☆42Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆96Updated last week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆69Updated this week
- For calculating exact geodesic distances on cortical surface meshes☆53Updated 9 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆41Updated 2 weeks ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- small mammals brain MRI☆16Updated last year
- ☆10Updated 4 years ago
- Enhancements of HCP Pipelines for non-human primates☆29Updated 2 years ago
- ☆38Updated 3 years ago