neurolabusc / Bru2NiiView external linksLinks
Bruker ParaVision to NIfTI conversion
☆14May 11, 2020Updated 5 years ago
Alternatives and similar repositories for Bru2Nii
Users that are interested in Bru2Nii are comparing it to the libraries listed below
Sorting:
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Dec 31, 2023Updated 2 years ago
- A modular toolkit for Bruker MRI raw-data handling.☆50Feb 3, 2026Updated last week
- Tools for MRI mouse brain morphometry☆32Jan 16, 2017Updated 9 years ago
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Nov 15, 2021Updated 4 years ago
- A General Rodent MRI Skull-Stripping Tool Based on Multi-Center Data☆10Dec 7, 2024Updated last year
- Small Animal Magnetic Resonance Imaging via Python.☆43Mar 4, 2024Updated last year
- Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI☆23Aug 20, 2021Updated 4 years ago
- A generally applicable whole-brain preprocessing toolbox for mice and rats☆12Jul 11, 2024Updated last year
- ☆13Jul 2, 2024Updated last year
- Simple bash script that downloads and installs ANTs in a unix environment☆13Jan 28, 2025Updated last year
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated this week
- The ANTsX Ecosystem for Mapping the Mouse Brain☆17Dec 2, 2025Updated 2 months ago
- A medical image converter☆32Jul 20, 2025Updated 6 months ago
- Reconstruction of preprocessed q-space images (dMRI)☆20Feb 3, 2026Updated last week
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆17Jan 15, 2024Updated 2 years ago
- Procedure to create monkey brain surfaces and project results to it☆16Feb 14, 2025Updated last year
- small mammals brain MRI☆15Oct 13, 2023Updated 2 years ago
- colour map for brain imaging☆19Updated this week
- Toolbox for developing pipelines for analysis of spectroscopy data. Includes code for loading Siemens spectroscopy data, and for spectral…☆23May 27, 2025Updated 8 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆50Updated this week
- Python module to handle Bruker Paravision MRI files (parameter files, raw data, processed data).☆21Feb 3, 2026Updated last week
- Patch based denoising method, targeting fMRI thermal noise removal.☆25Dec 19, 2025Updated last month
- An ansible playbook to deploy a complete standalone neuroimaging workstation☆26Oct 27, 2025Updated 3 months ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17May 22, 2024Updated last year
- Multi-Template Mouse Brain MRI Atlas (MBMA): both in-vivo and ex-vivo☆27Jan 20, 2024Updated 2 years ago
- ☆31May 17, 2024Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆73Oct 23, 2025Updated 3 months ago
- A Python package providing I/O interface for Bruker data sets☆29Feb 2, 2026Updated last week
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆35Jan 16, 2026Updated 3 weeks ago
- A Rat fMRI multi-center study☆33Aug 12, 2022Updated 3 years ago
- A Rat fMRI standardized protocol☆14Jul 25, 2024Updated last year
- Mouse brain network analysis of rs-fMRI and DTI data using graph theory☆10Jan 16, 2026Updated 3 weeks ago
- fMRIPrep for Rodents☆13Jun 6, 2023Updated 2 years ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆44Jan 29, 2026Updated 2 weeks ago
- SpinWalk, a framework for Monte-Carlo simulation to model spins random walk within a network. SpinWalk paper:☆14Jun 16, 2025Updated 7 months ago
- Based on EEG signal, the differential entropy feature is extracted, and the convolution neural network based on time domain network and a…☆13Sep 21, 2022Updated 3 years ago
- Scripts for the EEGLAB tutorial☆11Feb 7, 2025Updated last year
- Progression Models for Repeated Measures☆12Aug 21, 2022Updated 3 years ago
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆11Jul 25, 2024Updated last year