IBT-FMI / SAMRILinks
Small Animal Magnetic Resonance Imaging via Python.
☆43Updated last year
Alternatives and similar repositories for SAMRI
Users that are interested in SAMRI are comparing it to the libraries listed below
Sorting:
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆69Updated last week
- MP2RAGE Scripts - T1 map correction & Background noise removal☆58Updated 2 years ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated 2 months ago
- precon_all surface pipline☆22Updated last week
- Gradient Unwarping in Python☆36Updated 5 months ago
- A Python implementation of 'dual-coding'☆42Updated last year
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated 11 months ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆80Updated this week
- Support for CMRR multi-band pulse sequences☆58Updated 2 months ago
- ☆38Updated 3 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆92Updated 2 weeks ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 4 years ago
- Non-linear warps between common rhesus macaque brain templates☆26Updated last year
- A Rat fMRI multi-center study☆33Updated 2 years ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 11 months ago
- Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI☆46Updated last week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated 2 weeks ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆27Updated last month
- Processing tools for high-resolution neuroimaging☆71Updated 6 months ago
- PNH segmentation pipelines based on nipype☆23Updated last week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆94Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 7 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆39Updated 3 weeks ago
- Tools for mesh surface-based operations☆35Updated 3 months ago
- ☆17Updated last year
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆16Updated last year
- ☆10Updated 4 years ago
- BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)☆58Updated this week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆41Updated 2 weeks ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆109Updated 4 months ago