Alternatives and similar repositories for NHP-Freesurfer

Users that are interested in NHP-Freesurfer are comparing it to the libraries listed below

• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆16Updated last year
• neurabenn / precon_all
  precon_all surface pipline
  ☆22Updated last week
• HumanBrainED / NHP-BrainExtraction
  ☆38Updated 3 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆51Updated last month
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆28Updated 3 years ago
• koenhaak / congrads
  Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…
  ☆37Updated 6 years ago
• yeatmanlab / AFQ-Insight
  THIS SOFTWARE HAS MOVED!
  ☆10Updated 7 months ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆47Updated 11 months ago
• DiedrichsenLab / surfAnalysis
  Analysis functions for surface-based analyses, using freesurfer and connectome workbench
  ☆14Updated last year
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆35Updated 3 months ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆25Updated 2 months ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆38Updated 2 years ago
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆35Updated last year
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆67Updated last month
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 4 years ago
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆62Updated 9 months ago
• frantisekvasa / rotate_parcellation
  Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.
  ☆44Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 6 months ago
• PRIME-RE / prime-re.github.io
  Open resource exchange platform for non-human primate neuroimaging
  ☆19Updated last month
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆20Updated last year
• wayalan / HCPex
  An extended Human Connectome Project multimodal parcellation atlas of the human cortex and subcortical areas
  ☆35Updated 8 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆41Updated 2 weeks ago
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆19Updated 8 months ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆30Updated last year
• NSBLab / DiCER
  Diffuse Cluster Estimation and Regression. A de-noising tool.
  ☆19Updated 2 years ago
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆35Updated 5 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 7 months ago
• atdemarco / svrlsmgui
  A graphical multivariate lesion-symptom mapping toolbox
  ☆11Updated 11 months ago
• netneurolab / markello_spatialnulls
  Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)
  ☆22Updated 4 years ago