Alternatives and similar repositories for atlasBREX

Users that are interested in atlasBREX are comparing it to the libraries listed below

• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆24Updated 3 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆143Updated last month
• poldracklab / pydeface
  defacing utility for MRI images
  ☆124Updated last year
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆32Updated 4 years ago
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆261Updated last week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆158Updated 2 months ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆46Updated 4 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆70Updated this week
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆37Updated 6 months ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆99Updated last week
• nmpowell / mousemorph
  Tools for MRI mouse brain morphometry
  ☆31Updated 8 years ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆96Updated 2 weeks ago
• sammba-mri / sammba-mri
  small mammals brain MRI
  ☆16Updated last year
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆165Updated 3 weeks ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 7 months ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆73Updated this week
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆42Updated 3 weeks ago
• Aswendt-Lab / AIDAmri
  Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain
  ☆30Updated this week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆28Updated last year
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated last week
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆331Updated last month
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆48Updated 2 months ago
• BrkRaw / brkraw
  BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
  ☆47Updated last year
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆98Updated 10 months ago
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆60Updated 2 years ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆60Updated 9 months ago
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆123Updated last year
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆50Updated 2 weeks ago