jlohmeier / atlasBREXLinks
atlasBREX: Automated averaged template-derived brain extraction in animal MRI
☆16Updated last year
Alternatives and similar repositories for atlasBREX
Users that are interested in atlasBREX are comparing it to the libraries listed below
Sorting:
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆24Updated 4 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆149Updated this week
- Tools for MRI mouse brain morphometry☆31Updated 8 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- Preprocessing of diffusion MRI☆162Updated 2 weeks ago
- small mammals brain MRI☆16Updated last year
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 5 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- dMRI based fiber tracking using parallel transport tractography☆27Updated 2 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆31Updated last month
- Flexible DICOM conversion into structured directory layouts☆264Updated last week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆71Updated last week
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆100Updated 2 weeks ago
- defacing utility for MRI images☆126Updated last year
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- Gradient Unwarping in Python☆38Updated 8 months ago
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆75Updated this week
- Small Animal Magnetic Resonance Imaging via Python.