Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI
☆23Aug 20, 2021Updated 5 years ago
Alternatives and similar repositories for MU-Net
Users that are interested in MU-Net are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Apr 8, 2026Updated 6 months ago
- Multi-Template Mouse Brain MRI Atlas (MBMA): both in-vivo and ex-vivo☆28Jan 20, 2024Updated 2 years ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆42Nov 28, 2025Updated 11 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆39Oct 9, 2026Updated 3 weeks ago
- Generate a package-manager-friendly mouse brain atlases collection.☆23Aug 4, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Matlab GUI for single R2*/T2* mapping with multi-echo GRE data☆14Oct 4, 2022Updated 4 years ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆19Jan 15, 2024Updated 2 years ago
- ☆20Jun 17, 2024Updated 2 years ago
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Nov 15, 2021Updated 4 years ago
- Bruker ParaVision to NIfTI conversion☆14May 11, 2020Updated 6 years ago
- Tools for MRI mouse brain morphometry☆32Jan 16, 2017Updated 9 years ago
- Small Animal Magnetic Resonance Imaging via Python.☆44Mar 4, 2024Updated 2 years ago
- Crowd-sourced in vivo probabilistic atlas of subcortical brain nuclei☆12Mar 9, 2020Updated 6 years ago
- Scripts to preprocess mouse MRI/fMRI/dMRI☆12May 22, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A dreaded sunny day / So I meet you at the cemetery gates / Keats and Yeats are on your side / While Wilde is on mine☆12Jan 13, 2016Updated 10 years ago
- A modular toolkit for Bruker MRI raw-data handling.☆57Oct 21, 2026Updated last week
- Simple bash script that downloads and installs ANTs in a unix environment☆13Jan 28, 2025Updated last year
- A generally applicable whole-brain preprocessing toolbox for mice and rats☆14Jul 11, 2024Updated 2 years ago
- Gray-matter Based Spatial Statistics☆23Apr 19, 2023Updated 3 years ago
- small mammals brain MRI☆15Oct 13, 2023Updated 3 years ago
- Procedure to create monkey brain surfaces and project results to it☆17Feb 14, 2025Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated 2 years ago
- MRtrix3 module for motion correction and scattered slice reconstruction in multi-shell diffusion MRI.☆13Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Flow Processing Tool (Matlab) for 4D flow MRI data☆19Aug 21, 2026Updated 2 months ago
- A medical image converter☆32Jul 20, 2025Updated last year
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Mar 5, 2024Updated 2 years ago
- ☆41Mar 3, 2022Updated 4 years ago
- A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://ww…☆31Oct 23, 2026Updated last week
- improved susceptibility weighted imaging using multi-echo aquisitions☆30Updated this week
- The ANTsX Ecosystem for Mapping the Mouse Brain☆25Dec 2, 2025Updated 11 months ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆23Jul 4, 2022Updated 4 years ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆18Sep 30, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆12Jul 25, 2024Updated 2 years ago
- Mouse brain network analysis of rs-fMRI and DTI data using graph theory☆10Jan 16, 2026Updated 9 months ago
- ☆10Mar 15, 2024Updated 2 years ago
- Federated Learning framework extending the nnUNet☆16Oct 19, 2026Updated 2 weeks ago
- Developing a Brain Atlas through Deep Learning☆53Aug 9, 2025Updated last year
- Open source MR coil generator☆48Oct 25, 2026Updated last week
- Trained TensorFlow models for 3D image processing☆29Jan 31, 2024Updated 2 years ago