GaryLiu152 / chemprop_abaucin
Personal branch of chemprop used to predict the antibiotics Abaucin
☆27Updated last year
Alternatives and similar repositories for chemprop_abaucin:
Users that are interested in chemprop_abaucin are comparing it to the libraries listed below
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆91Updated 2 weeks ago
- Install alphafold on the local machine, get out of docker.☆101Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆83Updated last year
- A domain parser for Alphafold models☆35Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆36Updated last week
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆76Updated 8 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆104Updated 7 months ago
- ☆66Updated 7 months ago
- ☆29Updated 3 years ago
- ☆49Updated last month
- Text-guided protein design☆47Updated 3 weeks ago
- PLM based active learning model for protein engineering☆78Updated 8 months ago
- ColabFold protocol☆50Updated 6 months ago
- a collection of colabs useful for molecular biology☆30Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆167Updated last week
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆70Updated last year
- Fast protein structure searching or your money back☆101Updated 2 weeks ago
- Evolutionary velocity with protein language models☆90Updated last year
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆54Updated last month
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated last year
- ProteinChat: A frontier protein-language generative model designed to decode the molecular language of proteins.☆47Updated last month
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆31Updated 4 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆35Updated 7 months ago
- LoRA for protein language models☆36Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆52Updated 2 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆21Updated 2 months ago
- Protein language model trained on coding DNA☆46Updated 6 months ago
- ☆38Updated 7 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆44Updated 2 weeks ago
- Neural Networks for Protein Sequence Alignment☆120Updated 5 months ago