Alternatives and similar repositories for chemprop_abaucin

Users that are interested in chemprop_abaucin are comparing it to the libraries listed below

• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆103Updated 4 years ago
• MicroResearchLab / AMP-potency-prediction-EvoGradient
  A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…
  ☆41Updated 5 months ago
• amirpandi / Deep_AMP
  Generator and regressor neural networks for antimicrobial peptides
  ☆25Updated 2 years ago
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆121Updated last year
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆41Updated last year
• OATML-Markslab / EVEscape
  Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
  ☆70Updated 2 years ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆113Updated 4 months ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆87Updated last year
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆32Updated last year
• PDBeurope / pdb-images
  Generates images from mmCIF/BCIF files
  ☆44Updated 5 months ago
• Gardner-BinfLab / TISIGNER-ReactJS
  TISIGNER: Unleash the power of synthetic biology
  ☆28Updated 8 months ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆95Updated last month
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆76Updated 10 months ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆65Updated last year
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆56Updated last year
• BioSystemsUM / propythia
  Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical pro…
  ☆35Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆91Updated last year
• steineggerlab / foldmason
  Multiple Protein Structure Alignment at Scale with FoldMason
  ☆207Updated 3 months ago
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆102Updated 11 months ago
• flatironinstitute / deepblast
  Neural Networks for Protein Sequence Alignment
  ☆135Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated 3 weeks ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆50Updated 2 months ago
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆44Updated 6 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆63Updated 9 months ago
• pgmikhael / protgps
  ☆97Updated 7 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆46Updated 2 years ago
• hmdlab / raptgen
  ☆28Updated 2 years ago
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆34Updated last year
• denisbeslic / denovopipeline
  Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
  ☆44Updated last year
• weizhongli / cdhit-web-server
  ☆21Updated 3 years ago