slotThe / rqView external linksLinks
Functional command-line JSON processor with a bidirectional type system
☆25May 18, 2025Updated 8 months ago
Alternatives and similar repositories for rq
Users that are interested in rq are comparing it to the libraries listed below
Sorting:
- Haplotype phaser for next-generation sequencing data☆13Jan 13, 2022Updated 4 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- A `Send` version of `Iterator::chunks`☆20Nov 15, 2025Updated 2 months ago
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆17Jan 30, 2026Updated 2 weeks ago
- A CNN model to identify MEIs in WGS☆12Mar 4, 2025Updated 11 months ago
- Wait for async tasks☆13Dec 22, 2022Updated 3 years ago
- Python library for simple and complex indels.☆12Jan 22, 2024Updated 2 years ago
- A pipeline creation tool using Snakemake☆12Updated this week
- Useful extension utilities for thiserror.☆14Dec 4, 2025Updated 2 months ago
- ☆13Apr 18, 2022Updated 3 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated 9 months ago
- Library for Bedrock Archives in Rust☆18Dec 25, 2025Updated last month
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated last month
- A small, auxiliary index to massively improve parallel fastq parsing☆30Updated this week
- Utility for running lints specified from files☆12Jul 7, 2022Updated 3 years ago
- Build a rustc sysroot with custom flags☆18Oct 24, 2025Updated 3 months ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 5 years ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆28Apr 24, 2025Updated 9 months ago
- Tumour-only somatic mutation calling using long reads☆28Oct 28, 2024Updated last year
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- A simple, modern fuzzy finder tool to run examples in a Cargo project.☆14Apr 15, 2023Updated 2 years ago
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated last year
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 4 years ago
- A procedural macro that copy-pastes match arms for new type variant enums.☆16Feb 12, 2024Updated 2 years ago
- convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.☆14Apr 21, 2023Updated 2 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆12Oct 13, 2021Updated 4 years ago
- nimble aligner that will map your reads to the references on a laptop☆11Jun 29, 2017Updated 8 years ago
- ☆15Jul 3, 2025Updated 7 months ago
- mreps: software for tandem repeat identification in DNA☆15Nov 13, 2019Updated 6 years ago
- Learn what's changed on crates.io☆19Jan 5, 2026Updated last month
- Transfer HiFi read mappings from their own assembly contigs to a standard reference☆29Dec 30, 2025Updated last month
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆17Mar 10, 2022Updated 3 years ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- Concise bit field extraction☆62Nov 3, 2024Updated last year
- add true-negative SVs from a population callset to a truth-set.☆15Jun 17, 2022Updated 3 years ago
- A rust library to query and control TPLink smart plugs and smart lights.☆23Mar 4, 2024Updated last year
- STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed spe…☆18Aug 17, 2025Updated 5 months ago
- Automated Detection and Qualification of Differential Methylation☆16Nov 21, 2023Updated 2 years ago