Alternatives and similar repositories for ensembl-client

Users that are interested in ensembl-client are comparing it to the libraries listed below

• OBF / newsletter
  repo for OBF community newsletter updates
  ☆18Updated 4 months ago
• GMOD / Chado
  the GMOD database schema
  ☆41Updated 11 months ago
• MultiQC / test-data
  Test data for MultiQC.
  ☆22Updated last week
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• common-workflow-lab / wdl-cwl-translator
  A translator from WDL to CWL v1.2
  ☆27Updated this week
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆22Updated 5 months ago
• pombase / canto
  The PomBase community curation tool
  ☆19Updated 2 weeks ago
• galaxyproject / iwc
  Galaxy Workflows maintained by the Intergalactic Workflow Commission
  ☆34Updated this week
• ArcInstitute / binseq
  A high efficiency binary format for sequencing data
  ☆51Updated 2 weeks ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆56Updated this week
• snakemake / snakeface
  The snakemake interface, currently works like a notebook (under development)
  ☆18Updated 3 years ago
• broadinstitute / wdl-ide
  Rich IDE support for Workflow Description Language
  ☆42Updated 2 months ago
• nf-core / viralintegration
  Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.
  ☆17Updated this week
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• geneontology / go-annotation
  This repository hosts the tracker for issues pertaining to GO annotations.
  ☆38Updated last week
• umccr / cwl-ica
  A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
  ☆10Updated last month
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆36Updated 2 years ago
• Ensembl / ensembl-io
  File parsing and writing code for Ensembl
  ☆10Updated 4 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• nextflow-io / nf-prov
  ☆30Updated last month
• 10XGenomics / rust-bwa
  Rust wrapper of the BWA C API
  ☆18Updated 2 weeks ago
• malariagen / malariagen-data-python
  Analyse MalariaGEN data from Python
  ☆17Updated this week
• Nazeeefa / awesome-sequencing-tech-papers
  A collection of publications on comparison of high-throughput sequencing technologies.
  ☆27Updated 5 months ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆37Updated 2 weeks ago
• galaxyproject / gxadmin
  Handy command line utility for Galaxy administrators
  ☆23Updated 2 months ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated last week
• usegalaxy-eu / usegalaxy-eu-tools
  List of tools included in https://usegalaxy.eu
  ☆27Updated this week
• seqeralabs / tower-cli
  Nextflow Tower CLI tool
  ☆48Updated this week
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆73Updated this week