Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects
☆16Oct 30, 2023Updated 2 years ago
Alternatives and similar repositories for pycombat
Users that are interested in pycombat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- reComBat package to correct batch effects☆13Jul 17, 2023Updated 2 years ago
- MATLAB routines for fMRI/EEG/MEG data processing and visualization with FreeSurfer☆16May 7, 2026Updated last week
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆15Updated this week
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- ☆18Aug 22, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Analyzing animal collaboration with Bayesian and causal inference.☆13Jul 18, 2025Updated 10 months ago
- MFF Matlab file importer and exporter☆15Aug 1, 2024Updated last year
- ☆20Nov 17, 2025Updated 6 months ago
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)☆14Mar 16, 2026Updated 2 months ago
- d'accord is a non hybrid long read consensus program based on local de Bruijn graph assembly☆19Sep 12, 2018Updated 7 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Script for downloading S3 links from Amazon Web Service☆12Apr 24, 2019Updated 7 years ago
- Outliers and Robust Structures☆11Dec 23, 2020Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A high level deep learning framework for quickly prototyping networks with added tools in data visualisation, model interpretability and …☆21May 17, 2023Updated 3 years ago
- MNI152NLin2009cAsym☆14Jan 6, 2026Updated 4 months ago
- Matlab and Python code for pupillometry studies.☆14May 27, 2021Updated 4 years ago
- Very pink Barbie-inspired RStudio themes.☆17Dec 19, 2022Updated 3 years ago
- ☆13Updated this week
- HTS-compatible wrapper for IgBlast V-(D)-J mapping tool☆54Oct 29, 2024Updated last year
- ☆14Mar 15, 2019Updated 7 years ago
- Bunnymark benchmark for Love2D☆13Jan 26, 2022Updated 4 years ago
- Wu, C. M., Schulz, E., Speekenbrink, M., Nelson, J. D., & Meder, B. (2018). Generalization guides human exploration in vast decision spac…☆25Feb 15, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)☆52Aug 25, 2025Updated 8 months ago
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 7 years ago
- Project Design Review Checklist☆13Sep 22, 2018Updated 7 years ago
- Routines for teaching MRI principles in Stanford's Psych 204A☆14Feb 22, 2025Updated last year
- processing 10x genomics reads☆27Oct 27, 2019Updated 6 years ago
- FSL randomise related scripts☆10Jan 10, 2022Updated 4 years ago
- ☆13Apr 27, 2021Updated 5 years ago
- ASL pipeline for the Human Connectome Project☆13Oct 2, 2025Updated 7 months ago
- pyHPC workshop☆11May 17, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- assignments from courses at udacity☆10Mar 26, 2018Updated 8 years ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆18May 27, 2020Updated 5 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- ☆26Dec 29, 2020Updated 5 years ago
- A Rails application for biological ontologies☆23May 7, 2026Updated 2 weeks ago
- Source code for integrative nonnegative matrix factorization☆19Jul 12, 2018Updated 7 years ago
- OPerator TO any deep learning framework☆11Mar 24, 2023Updated 3 years ago