RittmanResearch / maybrain
Python package for analysing and visualising brain connectome data
☆10Updated 6 months ago
Related projects ⓘ
Alternatives and complementary repositories for maybrain
- ☆45Updated 2 years ago
- Code supporting Hansen et al., 2021 "Mapping gene transcription and neurocognition across human neocortex".☆19Updated 2 years ago
- Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)☆17Updated last year
- Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.☆27Updated 6 years ago
- ComBat Family of Harmonization Methods☆16Updated 2 months ago
- Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon☆31Updated 5 years ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data☆18Updated 2 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆19Updated 4 months ago
- Python codes and sample scripts for connectome-spatial smoothing (CSS)☆10Updated last year
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆26Updated 10 months ago
- Code used for Hippocampus Anterior/Posterior gene expression and neuroimaging analyses☆10Updated last year
- Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data☆21Updated last year
- The code to generate individualize state-specific node-level parcellations. For the original paper, see Salehi et al., "There is no singl…☆9Updated 5 years ago
- ☆31Updated 5 months ago
- Generative Modeling of Multivariate Relationships☆25Updated 11 months ago
- The QDECR package for vertex-wise analyses in R☆11Updated last year
- Maps gene samples into surface parcellation☆16Updated 6 years ago
- Codes and datasets for "Interpreting machine learning models in neuroimaging: a unified framework"☆29Updated 4 years ago
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆94Updated 2 months ago
- Tutorials for task-based activation and network analysis using Python based modules: Nilearn and Nistats. Notebooks prepared on Neurohack…☆25Updated 6 years ago
- ☆15Updated last year
- A Python library for Analytic Tractography☆9Updated 4 years ago
- Null models in network neuroscience☆25Updated 2 years ago
- A toolbox for biophysical network modeling on GPUs☆10Updated last week
- Simple and brief walkthroughs to help grad students/new users complete basic tasks with workbench command and common HCP pipeline output …☆15Updated 3 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆16Updated 4 months ago
- Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.☆38Updated last year
- JuSpyce - a toolbox for flexible assessment of spatial associations between brain maps☆10Updated last year
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆42Updated 5 months ago
- Python-based tutorial on Connectome-based Predictive Modeling (CPM), originally prepared for Georgetown Methods Lab.☆39Updated 4 years ago