RittmanResearch / maybrain
Python package for analysing and visualising brain connectome data
☆10Updated 10 months ago
Alternatives and similar repositories for maybrain:
Users that are interested in maybrain are comparing it to the libraries listed below
- Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon☆32Updated 6 years ago
- Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.☆28Updated 6 years ago
- Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)☆17Updated last year
- ComBat Family of Harmonization Methods☆18Updated 6 months ago
- The QDECR package for vertex-wise analyses in R☆12Updated last year
- Code supporting Hansen et al., 2021, Nature Human Behaviour "Mapping gene transcription and neurocognition across human neocortex".☆19Updated 2 years ago
- Permutation inference for Canonical Correlation Analysis☆23Updated 6 months ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data☆18Updated 2 years ago
- developmental cortical propagation detection + analyses☆9Updated 2 years ago
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Updated 5 years ago
- A toolbox for biophysical network modeling on GPUs☆10Updated 3 weeks ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆22Updated 8 months ago
- ☆37Updated 3 months ago
- Code used for Hippocampus Anterior/Posterior gene expression and neuroimaging analyses☆10Updated last year
- Code used in the lifespan brainchart project☆33Updated 2 years ago
- ☆46Updated 3 years ago
- Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data☆23Updated 2 years ago
- Maps gene samples into surface parcellation☆19Updated 7 years ago
- Generative Modeling of Multivariate Relationships☆25Updated last year
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆46Updated 9 months ago
- Python codes and sample scripts for connectome-spatial smoothing (CSS)☆11Updated last year
- Codes and datasets for "Interpreting machine learning models in neuroimaging: a unified framework"☆29Updated 5 years ago
- The code to generate individualize state-specific node-level parcellations. For the original paper, see Salehi et al., "There is no singl…☆9Updated 5 years ago
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆96Updated 6 months ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆16Updated 8 months ago
- This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…☆52Updated 4 years ago
- Code used in the lifespan brainchart project☆70Updated 3 weeks ago
- Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.☆34Updated 4 years ago
- Subtype and Stage Inference [Young+, Nature Communications 2018]☆12Updated 3 years ago