Similarity network fusion in Python
☆94Apr 8, 2020Updated 6 years ago
Alternatives and similar repositories for snfpy
Users that are interested in snfpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multi-omics integration method using AE and GCN☆42Jul 2, 2026Updated last month
- Automated Preprocessing Pipeline for Fetal Resting-State fMRI Data☆15Mar 24, 2023Updated 3 years ago
- Code supporting the recent preprint Markello et al., 2020☆36Jan 12, 2025Updated last year
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆251Jun 9, 2026Updated 2 months ago
- A Python implementation of Partial Least Squares (PLS) decomposition☆85Sep 18, 2025Updated 10 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- A toolbox for comparing brain maps☆340Jun 13, 2026Updated 2 months ago
- A half-serious project to generate **very** serious brain explosions.☆15Jul 11, 2022Updated 4 years ago
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Aug 13, 2021Updated 5 years ago
- This is the supplementary code for CRC-multi-kingdom☆17Nov 8, 2021Updated 4 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆116Updated this week
- This repository contains original codes for major analyses in the manuscript 'The multi-kingdom airway microbiome mediates the interactio…☆13Apr 27, 2024Updated 2 years ago
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Oct 20, 2021Updated 4 years ago
- Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)☆38Apr 4, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Contains libraries for reading, writing and analysing Magnetic Resonance Spectroscopy and Imaging (MRS & MRI) data.☆37Jun 12, 2017Updated 9 years ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis☆18Nov 1, 2018Updated 7 years ago
- Differential Mutation Analysis☆11May 24, 2020Updated 6 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- MMGCN：Multi-view Multichannel Attention Graph Convolutional Network for miRNA-disease Association Prediction☆20Apr 7, 2021Updated 5 years ago
- Variational Transformer Autoencoder with Manifolds Learning☆17Oct 15, 2023Updated 2 years ago
- a deep learning framework for essential protein prediction☆13Mar 24, 2023Updated 3 years ago
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆36Jul 22, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- IJCAI 2022- Escaping Feature Twist: A Variational Graph Auto-Encoder for Node Clustering☆21Apr 24, 2023Updated 3 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆16Aug 6, 2026Updated last week
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆51Apr 29, 2023Updated 3 years ago
- uPU, nnPU and PN learning with Extra Trees classifier.☆20Dec 2, 2024Updated last year
- [Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks☆14Sep 5, 2019Updated 6 years ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆35Jun 30, 2021Updated 5 years ago
- ☆11Feb 18, 2021Updated 5 years ago
- Python Library for interaction with US NLM Daily Med API☆12Feb 9, 2017Updated 9 years ago
- ☆42Jun 30, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Workshop in omics integration and systems biology☆89Nov 25, 2024Updated last year
- MOVED TO https://github.com/nipreps/dmriprep☆17Dec 26, 2022Updated 3 years ago
- Simple and brief walkthroughs to help grad students/new users complete basic tasks with workbench command and common HCP pipeline output …☆16May 18, 2021Updated 5 years ago
- Tissue-specific variant effect predictions on splicing☆44May 23, 2023Updated 3 years ago
- ☆750Aug 4, 2026Updated last week
- Website for the 2021 OHBM Hackathon☆22Oct 18, 2022Updated 3 years ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆11Sep 12, 2025Updated 11 months ago