CSi-Studio / 3D-MSNet
A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data
☆28Updated last year
Alternatives and similar repositories for 3D-MSNet:
Users that are interested in 3D-MSNet are comparing it to the libraries listed below
- metabolomics data analysis platform☆20Updated last year
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Updated last year
- Support for Java, C#, Python☆17Updated 11 months ago
- Aird format Conversion Client for Verdor File Conversion☆16Updated 3 weeks ago
- An open-source Python package to unify raw MS data accession and storage.☆21Updated last week
- ☆32Updated last month
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last week
- Streamlining Mass Spectrometry Data Visualization with Pandas☆13Updated last week
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆25Updated 4 months ago
- EasyPQP: Simple library generation for OpenSWATH☆10Updated last month
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated 10 months ago
- Democratizing ML in proteomics☆34Updated this week
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 4 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last month
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- ☆26Updated last year
- Instrument Application Programming Interface☆45Updated last month
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆14Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- ☆16Updated 2 years ago
- Flash entropy search☆14Updated last year
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆43Updated 2 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last week
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆86Updated 3 weeks ago