Search, download, and prepare brain atlas data.
☆17Mar 10, 2023Updated 3 years ago
Alternatives and similar repositories for Atlas-Download-Tools
Users that are interested in Atlas-Download-Tools are comparing it to the libraries listed below
Sorting:
- API documentation for BlueBrain projects:☆12Dec 1, 2021Updated 4 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne…☆136Oct 29, 2025Updated 4 months ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)☆15Mar 18, 2016Updated 10 years ago
- ☆15Jul 15, 2025Updated 8 months ago
- Provides a local database of in-house and published genomes for Bacteria and Archaea from NCBI☆24Sep 3, 2014Updated 11 years ago
- Blue Brain text mining toolbox for semantic search and structured information extraction☆46May 1, 2023Updated 2 years ago
- Developing a Brain Atlas through Deep Learning☆53Aug 9, 2025Updated 7 months ago
- A system for building mouse brain atlas from histology series☆11Aug 15, 2020Updated 5 years ago
- Quantitative Insights Into Microbial Ecology - parsing and plotting functions for R☆18May 19, 2017Updated 8 years ago
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆18Feb 21, 2022Updated 4 years ago
- Simulate realistic diffusion-weighted MR data☆19Mar 2, 2023Updated 3 years ago
- Epigenomic enrichment analysis of age-related genomic regions☆17Nov 2, 2018Updated 7 years ago
- ☆16Apr 28, 2023Updated 2 years ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆33Jan 3, 2025Updated last year
- A course in the theory and practice of phylogenetic inference from DNA sequence data☆31Feb 11, 2026Updated last month
- CycleGAN, a variation of GAN (Generative Adversarial Network) which works well with unpaired data thus fits best for medical images. Used…☆22Jan 6, 2021Updated 5 years ago
- ☆13Oct 22, 2023Updated 2 years ago
- Read ROI files .zip or .roi generated with ImageJ.☆53Jun 1, 2022Updated 3 years ago
- Geologic Minecraft Mod☆19Mar 11, 2026Updated last week
- Large language models (LLMs) made easy, EasyLM is a one stop solution for pre-training, finetuning, evaluating and serving LLMs in JAX/Fl…☆11Apr 26, 2023Updated 2 years ago
- HistoSeg is an Encoder-Decoder DCNN which utilizes the novel Quick Attention Modules and Multi Loss function to generate segmentation mas…☆24Apr 11, 2025Updated 11 months ago
- ChatRPC is a framework that allows large language models to interact with external services.☆10Dec 25, 2023Updated 2 years ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 7 months ago
- ☆11Jul 25, 2017Updated 8 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28May 22, 2022Updated 3 years ago
- Public release repository for STochastic Engine for Pathway Simulation (STEPS)☆43May 19, 2025Updated 10 months ago
- creating hybrid-gene phylogenetic trees for diversity analyses☆30Aug 23, 2022Updated 3 years ago
- 📜 the Great Automatic Nomenclator — The Next Million Names for Archaea and Bacteria☆41Oct 28, 2025Updated 4 months ago
- A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.☆14Mar 11, 2026Updated last week
- A place to host demos for custom actions.☆14Feb 2, 2022Updated 4 years ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- Core utilities for single-cell RNA-seq☆12Apr 13, 2025Updated 11 months ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- Simple linear algebra implementation using asm.js☆15Apr 9, 2013Updated 12 years ago
- Fast radial symmetry transform implemented in pure python.☆13Apr 27, 2019Updated 6 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆93Jul 16, 2021Updated 4 years ago
- FinalVersions☆17Apr 3, 2017Updated 8 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆145Mar 3, 2026Updated 2 weeks ago