BioPAX / PaxtoolsLinks
The BioPAX Object Model, API and utilities implemented in Java
☆25Updated last year
Alternatives and similar repositories for Paxtools
Users that are interested in Paxtools are comparing it to the libraries listed below
Sorting:
- Build and test new apps for the KBase platform☆28Updated 6 months ago
- Pathway visualization and analysis tool for Pathway Commons and other BioPAX data☆13Updated 3 years ago
- MView extracts and reformats the results of a sequence database search or multiple alignment.☆32Updated 11 months ago
- Python-based framework for computational immunomics☆40Updated 4 years ago
- ☆19Updated 3 years ago
- LLM-based gene function enrichment tool☆13Updated 6 months ago
- Pipelines in genomics☆23Updated 3 years ago
- biotoolsregistry : discovery portal for bioinformatics☆80Updated last week
- ☆21Updated 9 years ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Updated 5 years ago
- NeoFlow: a proteogenomics pipeline for neoantigen discovery☆26Updated 9 months ago
- ☆25Updated last year
- Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python☆18Updated 8 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆33Updated last year
- PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways☆59Updated last year
- Associate pathways + gene ontologies with significant genes.☆10Updated 2 years ago
- A project to capture biological pathway data from academic papers☆29Updated 5 months ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 3 months ago
- BioThings API framework - Making high-performance API for biological annotation data☆47Updated last week
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆33Updated 5 months ago
- 🎺 Plot DNA digestion band patterns with Python☆20Updated 3 months ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- Python module for lipidomics LC MS/MS data analysis☆17Updated last year
- Interactive TooManyCells Trees☆13Updated 8 months ago
- A metadata commons to store research software metadata☆41Updated this week
- ☆33Updated 4 years ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24Updated 3 months ago
- High-level analysis package for (bio-)informatics☆10Updated last year