BioPAX / PaxtoolsLinks
The BioPAX Object Model, API and utilities implemented in Java
☆27Updated last year
Alternatives and similar repositories for Paxtools
Users that are interested in Paxtools are comparing it to the libraries listed below
Sorting:
- Build and test new apps for the KBase platform☆28Updated 11 months ago
- Python-based framework for computational immunomics☆40Updated 4 years ago
- GeneNetwork (2nd generation)☆38Updated this week
- Associate pathways + gene ontologies with significant genes.☆10Updated 2 years ago
- biotoolsregistry: discovery portal for bioinformatics☆82Updated this week
- ☆19Updated 3 years ago
- 🎺 Plot DNA digestion band patterns with Python☆20Updated 8 months ago
- LLM-based gene function enrichment tool☆14Updated 11 months ago
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 7 months ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Updated 2 years ago
- The Systems Biology Simulation Core Library (SBSCL) provides an efficient and exhaustive Java implementation of methods to interpret the …☆25Updated 3 months ago
- Project Manager for NGS data analysis☆31Updated last week
- PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways☆63Updated last year
- BioThings API framework - Making high-performance API for biological annotation data☆50Updated this week
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Updated last year
- MView extracts and reformats the results of a sequence database search or multiple alignment.☆33Updated last year
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Updated 3 weeks ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆26Updated 4 years ago
- a python library for working with flow cytometry data.☆14Updated 10 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆19Updated 5 years ago
- Curation and analysis of metabolic models☆36Updated 2 years ago
- A metadata commons to store research software metadata☆46Updated this week
- Fishers Exact Test for Python (Cython)☆66Updated 10 months ago
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 9 months ago
- Lightweight workflows in bioinformatics:☆24Updated 11 years ago
- ☆32Updated 3 weeks ago
- ☆34Updated 5 years ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 4 years ago