Alternatives and similar repositories for pathvisio

Users that are interested in pathvisio are comparing it to the libraries listed below

• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 4 years ago
• BioPAX / paxtoolsr
  The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) mole…
  ☆10Updated 2 years ago
• bgruening / coding_for_big_data
  X things you should take into consideration if you code for big data analysis
  ☆23Updated 7 years ago
• ncbi / magicblast
  ☆36Updated 2 months ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 10 months ago
• sanger-pathogens / companion
  This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion
  ☆21Updated 4 years ago
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 8 years ago
• BaderLab / EnrichmentMapApp
  The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
  ☆34Updated 8 months ago
• keoughkath / AlleleAnalyzer
  A software tool for personalized and allele-specific CRISPR editing.
  ☆17Updated 3 years ago
• COMBINE-lab / wasabi
  Prepare Sailfish and Salmon output for downstream analysis
  ☆43Updated 6 years ago
• geneontology / amigo
  AmiGO is the public interface for the Gene Ontology.
  ☆31Updated this week
• Edinburgh-Genome-Foundry / SBOL-Visual-CSS
  Draw genetic elements with HTML & CSS
  ☆16Updated 8 years ago
• appris / appris
  Annotating principal splice isoforms
  ☆14Updated 8 months ago
• nmdp-bioinformatics / dash
  Data Standards Hackathon for NGS based typing.
  ☆13Updated 4 months ago
• 3DGenomes / TADkit
  3D Genome Browser
  ☆31Updated 3 years ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆47Updated last week
• ncbi / blast-cloud
  Documentation for NCBI BLAST AMI
  ☆12Updated 3 years ago
• seqan / needle
  A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences
  ☆14Updated this week
• OBF / FALDO
  Feature Annotation Location Description Ontology
  ☆34Updated 5 years ago
• Ensembl / ensembl-variation
  The Ensembl Variation Perl API and SQL schema
  ☆28Updated 2 weeks ago
• pkerpedjiev / gene-citation-counts
  ☆33Updated 4 years ago
• bio-tools / biotoolsRegistry
  biotoolsregistry : discovery portal for bioinformatics
  ☆77Updated last week
• Caleydo / ordino
  Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn
  ☆12Updated last year
• madprime / genevieve
  Genevieve genome report tool
  ☆14Updated 2 years ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆31Updated 2 years ago
• galaxyproject / bioblend
  A Python library for interacting with the Galaxy API
  ☆93Updated last week
• desmid / mview
  MView extracts and reformats the results of a sequence database search or multiple alignment.
  ☆30Updated 9 months ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 2 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago