AstraZeneca / biology-for-aiLinks
learning biology syllabus, geared for machine learning folks
☆116Updated 2 years ago
Alternatives and similar repositories for biology-for-ai
Users that are interested in biology-for-ai are comparing it to the libraries listed below
Sorting:
- A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.☆153Updated last week
- Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)☆80Updated 3 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆83Updated 3 months ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆236Updated 3 months ago
- ☆68Updated 2 years ago
- A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).☆140Updated this week
- Biological Network Integration using Convolutions☆62Updated last year
- code for Gogleva et al manuscript☆46Updated 2 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- Images and other data from the JUMP Cell Painting Consortium☆176Updated this week
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆151Updated last week
- Network-based project to explore gene connectivity through biological scales☆23Updated 11 months ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆133Updated 3 years ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Updated last month
- Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.☆89Updated 3 months ago
- Variational Auto-Encoder that generates synthetic gene expression data☆24Updated 2 years ago
- A Curated List of Computational Biology Datasets Suitable for Machine Learning☆183Updated last year
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆89Updated 2 years ago
- An awesome repository of community-curated applications of ChatGPT and other LLMs in computational biology☆264Updated last year
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆124Updated 10 months ago
- ☆217Updated 2 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆112Updated 3 years ago
- ProCyon: A multimodal foundation model for protein phenotypes☆40Updated 3 weeks ago
- Contextual AI models for single-cell protein biology☆88Updated 7 months ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆96Updated 3 years ago
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- Modelling the Language of Life - Deep Learning Protein Sequences☆74Updated 4 years ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆77Updated last month
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆123Updated 7 months ago