AberystwythSystemsBiology / MEDIALpy
A small python package that allows the user to look up common medical abbreviations.
☆12Updated 3 years ago
Alternatives and similar repositories for MEDIALpy
Users that are interested in MEDIALpy are comparing it to the libraries listed below
Sorting:
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- Python module to parse UMLS source files☆19Updated 2 years ago
- ☆16Updated 4 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆23Updated last year
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆16Updated 10 months ago
- ☆28Updated 4 years ago
- ☆12Updated 2 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆38Updated 4 months ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- Predicting adverse drug reactions from a knowledge graph☆27Updated 4 years ago
- ☆22Updated 2 years ago
- ☆24Updated 4 months ago
- Medical Relations and Entities Extraction☆36Updated 2 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated 2 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- Medical Similarity Dataset creation from SNOMED☆27Updated 2 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆31Updated 2 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 5 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- Python wrapper for UMLS REST API☆10Updated 6 years ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆34Updated last week
- UMLS Graph database for semantic queries☆21Updated 2 years ago
- Running MedCAT as a RESTful web service☆22Updated 2 months ago
- UMLS Terminology Server☆18Updated 7 months ago