binbinbinv / GATSolView external linksLinks
GATSol, an enhanced predictor of protein solubility through the synergy of 3D structure information and large language modeling
☆17Sep 7, 2024Updated last year
Alternatives and similar repositories for GATSol
Users that are interested in GATSol are comparing it to the libraries listed below
Sorting:
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆21Aug 6, 2025Updated 6 months ago
- ☆27Apr 22, 2024Updated last year
- ☆14Oct 5, 2024Updated last year
- ☆23Jul 4, 2021Updated 4 years ago
- Sequence-based protein solubility prediction using multidimensional embedding☆12Apr 19, 2021Updated 4 years ago
- ☆12Jun 16, 2023Updated 2 years ago
- Prediction of protein melting temperatures directly from sequences☆11Apr 16, 2024Updated last year
- GitHub for AI4PD 2023 Workshop in Chile☆12Oct 12, 2023Updated 2 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆19Aug 6, 2025Updated 6 months ago
- Molecular Dynamics for Experimentalists☆65Nov 18, 2025Updated 2 months ago
- Some Rosetta Scripts that allow for various simple tasks☆14Jan 27, 2020Updated 6 years ago
- A Python framework for the rapid modeling of glycans☆18Oct 13, 2025Updated 4 months ago
- De novo design of small molecule binding sites into proteins☆12Apr 14, 2021Updated 4 years ago
- AlphaFold2 and RoseTTAFold predictions of the SARS-CoV-2 B.1.1.529 variant Spike protein with HADDOCK antibody interactions☆12Feb 10, 2023Updated 3 years ago
- Scoring methods for predicting the DDG upon protein mutation☆16Feb 20, 2023Updated 2 years ago
- Python rich client for visual protein Sequence to Structure Analysis☆18Oct 12, 2025Updated 4 months ago
- Fast, gene-specific joint humanisation of antibody heavy and light chains.☆18Nov 11, 2025Updated 3 months ago
- High-throughput framework for running molecular simulations for METL☆23Sep 18, 2025Updated 4 months ago
- ☆22Dec 15, 2024Updated last year
- ☆50Aug 13, 2025Updated 6 months ago
- Predict protein thermostability with ML☆20Aug 20, 2024Updated last year
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Mar 29, 2021Updated 4 years ago
- ☆15Jun 21, 2022Updated 3 years ago
- For the purpose of post progressing of MD carried by gromacs☆23Jul 2, 2025Updated 7 months ago
- 📈 Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).☆26May 16, 2025Updated 8 months ago
- ☆23Jul 14, 2023Updated 2 years ago
- ☆28Aug 26, 2025Updated 5 months ago
- Geometry-aware protein binding site predictor☆25Aug 29, 2024Updated last year
- Lightweight induced fit docking☆21May 22, 2023Updated 2 years ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆23Jun 3, 2023Updated 2 years ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆29Oct 6, 2022Updated 3 years ago
- ☆26May 14, 2025Updated 9 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆62Feb 3, 2026Updated last week
- Protein design and variant prediction using autoregressive generative models☆24Feb 27, 2023Updated 2 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆27May 26, 2025Updated 8 months ago
- ☆32Sep 23, 2023Updated 2 years ago
- ☆20Oct 4, 2022Updated 3 years ago
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆119Dec 20, 2023Updated 2 years ago
- ☆39Jun 24, 2024Updated last year