GATSol, an enhanced predictor of protein solubility through the synergy of 3D structure information and large language modeling
☆20Sep 7, 2024Updated last year
Alternatives and similar repositories for GATSol
Users that are interested in GATSol are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 📈 Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).☆36May 16, 2025Updated last year
- DeepSoluE☆18Sep 18, 2023Updated 2 years ago
- ☆11Mar 28, 2024Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆27Feb 23, 2026Updated 5 months ago
- Protein solubility prediction tools☆24Dec 13, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Prediction of protein melting temperatures directly from sequences☆14Apr 16, 2024Updated 2 years ago
- ☆23Jul 4, 2021Updated 5 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆22Feb 23, 2026Updated 5 months ago
- ☆27Apr 22, 2024Updated 2 years ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆48Dec 16, 2024Updated last year
- Sequence-based protein solubility prediction using multidimensional embedding☆13Apr 19, 2021Updated 5 years ago
- ☆23Apr 8, 2026Updated 3 months ago
- GitHub for AI4PD 2023 Workshop in Chile☆12Oct 12, 2023Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆15May 26, 2026Updated 2 months ago
- Associated code/pipeline for the publication "AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting d…☆15Feb 18, 2025Updated last year
- ☆28Oct 3, 2025Updated 9 months ago
- ☆31Aug 26, 2025Updated 11 months ago
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆76Mar 1, 2022Updated 4 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆84May 25, 2026Updated 2 months ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆77Apr 13, 2026Updated 3 months ago
- The pytorch code of TDFold☆21Feb 25, 2026Updated 5 months ago
- ☆43Aug 19, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- LABind: Identifying Protein Binding Ligand-Aware Sites via Learning Interactions Between Ligand and Protein☆16Aug 21, 2025Updated 11 months ago
- A small web ui and python api service to predict protein melting point temperatures.☆20Jan 21, 2025Updated last year
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Molecular Dynamics for Experimentalists☆70Apr 17, 2026Updated 3 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆69Jul 14, 2026Updated last week
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆32Oct 6, 2022Updated 3 years ago
- ☆12Jun 16, 2023Updated 3 years ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Mar 29, 2021Updated 5 years ago
- ☆18Oct 5, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scores for Hydrophobicity and Charges based on SASAs☆45Jun 12, 2025Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆114Apr 15, 2026Updated 3 months ago
- A generalized enzyme kinetics parameter prediction model.☆96Oct 2, 2025Updated 9 months ago
- Fast, gene-specific joint humanisation of antibody heavy and light chains.☆24Nov 11, 2025Updated 8 months ago
- PyRosetta4 v2026-02-06 with (Global Interpreter Lock) disabled☆20Mar 22, 2026Updated 4 months ago
- Let LLM run your MDs.☆263Sep 18, 2025Updated 10 months ago
- Humanness of de-novo designed proteins☆46May 19, 2025Updated last year