Metal binding prediction using coevolution
☆24May 19, 2024Updated 2 years ago
Alternatives and similar repositories for MetalNet
Users that are interested in MetalNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆46Jan 10, 2024Updated 2 years ago
- ☆25Aug 5, 2025Updated 11 months ago
- ☆63Apr 9, 2024Updated 2 years ago
- ☆10May 17, 2021Updated 5 years ago
- ☆13Nov 5, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Lu Lab @ Tsinghua University☆19Nov 11, 2025Updated 8 months ago
- A script able to extract ligands from pdb structure(s) and remove them from the original structure. The ligands are identified according …☆15Jul 13, 2022Updated 4 years ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆20Dec 30, 2021Updated 4 years ago
- Sphinx themes ("stanford" and "neo-rtd") based on readthedocs.org☆10Jan 9, 2017Updated 9 years ago
- monae: multi-modal single-cell integration and imputation☆13Sep 13, 2024Updated last year
- ☆15Feb 13, 2023Updated 3 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 8 months ago
- Bioinformatics projects and code shared by Zhi John Lu☆10Jun 3, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆14Nov 24, 2023Updated 2 years ago
- Open source code for AlphaFold.☆12Jun 30, 2026Updated 3 weeks ago
- Python Spiders☆12Dec 15, 2023Updated 2 years ago
- Explainable deep hypergraph learning modeling the peptide secondary structure prediction☆13Feb 27, 2023Updated 3 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆121Updated this week
- Dual-attention Enhanced Spatial Transcriptomics Denoiser☆13May 8, 2025Updated last year
- A nextflow pipeline for polishing CLR assemblies☆18Feb 3, 2023Updated 3 years ago
- a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.☆17May 30, 2021Updated 5 years ago
- 钱院学辅 LaTeX 宏集☆11Aug 18, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- The GAN model for designing AMP☆17Aug 19, 2025Updated 11 months ago
- ☆15Mar 27, 2020Updated 6 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 3 years ago
- Code for the paper "Learning the fitness dynamics of pathogens from phylogenies"☆25Feb 26, 2026Updated 4 months ago
- ☆10Apr 28, 2019Updated 7 years ago
- our in-house version of ProteinMPNN☆40Feb 12, 2026Updated 5 months ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆33Jul 16, 2026Updated last week
- gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.☆323Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated last month
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- Python package for serving a local search engine. One command to download and serve a datastore---that's it 😎.☆26Jun 6, 2025Updated last year
- Self-supervised Pre-training of ECG Classifiers with Joint-Embedding Predictive Architecture☆16Oct 23, 2025Updated 9 months ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Mutation-centric "Interaction Language Model" for Edgetic PPI prediction☆16May 28, 2026Updated last month
- A curated biochemical database that integrates and refines data from KEGG and ATLAS databases to support precise analyses of biochemical …☆16May 13, 2026Updated 2 months ago