naive index and query scripts for free reference bioinformatics datasets
☆17Sep 22, 2024Updated last year
Alternatives and similar repositories for nosql-biosets
Users that are interested in nosql-biosets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Nov 15, 2018Updated 7 years ago
- Pathway-based and phylogenetically adjusted quantification of competition and cooperation between microbial species☆18Mar 17, 2021Updated 5 years ago
- https://jinghuazhao.github.io/pQTLtools/☆23Mar 25, 2025Updated 11 months ago
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Sep 28, 2021Updated 4 years ago
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated last week
- Generating graph structures from OWL ontologies☆12Nov 21, 2017Updated 8 years ago
- Explaining the genetic causality for complex diseases by deep association kernel learning☆15May 7, 2021Updated 4 years ago
- ☆11Nov 16, 2019Updated 6 years ago
- Python package for matrix storage and operations on hetnets☆14Mar 30, 2023Updated 2 years ago
- ☆25Mar 12, 2026Updated last week
- ☆12Jul 5, 2024Updated last year
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Aug 28, 2025Updated 6 months ago
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆14Updated this week
- MGnify RESTful API☆10Feb 11, 2026Updated last month
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- ☆12May 20, 2022Updated 3 years ago
- Microbiome Informatics - API and service usage examples☆14Oct 7, 2021Updated 4 years ago
- Assembly and intrahost / low-frequency variant calling for viral samples☆15Feb 12, 2020Updated 6 years ago
- Code available for the quantitative pharmacophores☆13Sep 7, 2022Updated 3 years ago
- Convert numpy mask to dicom rtstruct☆13Feb 28, 2023Updated 3 years ago
- Code to build the Target Central Resource Database (TCRD).☆11Jul 20, 2021Updated 4 years ago
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 5 years ago
- A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations☆13Nov 30, 2023Updated 2 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆31May 10, 2021Updated 4 years ago
- ☆13Feb 20, 2022Updated 4 years ago
- Parkinson’s Disease Classification from Speech Data using multiple Machine Learning approaches. This was implemented using scikit-learn P…☆14Feb 2, 2020Updated 6 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 4 years ago
- Graph Neural Network model for survival analysis from multi-omics data☆14Mar 9, 2022Updated 4 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆13Jun 4, 2020Updated 5 years ago
- A light weight adaptation React based mutation lollipop plot from cBioPortal frontend.☆13Dec 10, 2022Updated 3 years ago
- ☆14Sep 2, 2021Updated 4 years ago
- SIU: A Million-Scale Structural Small Molecule-Protein Interaction Dataset for Unbiased Bioactivity Prediction☆17Feb 17, 2025Updated last year
- Datably.ai☆17Jun 17, 2025Updated 9 months ago
- ☆16Aug 7, 2025Updated 7 months ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated 8 months ago
- Draw RNA secondary structures☆10Aug 20, 2021Updated 4 years ago
- ☆17Jul 30, 2024Updated last year
- A convolutional neural network model for relation extraction.☆12Mar 24, 2023Updated 2 years ago