teamtomo / membrain-seg
membrane segmentation in 3D for cryo-ET
☆59Updated this week
Alternatives and similar repositories for membrain-seg:
Users that are interested in membrain-seg are comparing it to the libraries listed below
- ☆43Updated last week
- ☆45Updated 4 months ago
- GPU-accelerated template matching for cryo-ET☆30Updated last week
- STAR file I/O in Python☆48Updated last week
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 6 months ago
- PIP package of cryoCARE☆28Updated 9 months ago
- ☆31Updated last year
- PyTom software for cryo-tomogram processing☆37Updated 4 months ago
- cryo-EM tomogram simulator☆20Updated this week
- A curated list of awesome computational cryo-ET methods.☆41Updated 3 months ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆37Updated this week
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆47Updated 2 months ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆23Updated last week
- cryo-ET particle picking by representation and metric learning☆32Updated 3 weeks ago
- cryolo documentation☆9Updated 8 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆21Updated this week
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆15Updated last year
- ☆13Updated last week
- A collaborative knowledge sharing platform for the cryo-ET community☆20Updated 5 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆23Updated last month
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆21Updated 2 months ago
- Parallel cryo electron tomography via beam image shift☆32Updated 3 weeks ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆27Updated 9 months ago
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆15Updated 2 months ago
- Self-supervised learning for isotropic cryoET reconstruction☆75Updated 2 weeks ago
- Generates synthetic datasets for Cryo-Electron Tomography☆24Updated this week
- Miscellaneous scripts for processing cryo-ET data☆12Updated this week
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆22Updated this week
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆17Updated 4 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆16Updated 2 weeks ago