A collaborative knowledge sharing platform for the cryo-ET community
☆20Aug 7, 2024Updated last year
Alternatives and similar repositories for teamtomo-site-archive
Users that are interested in teamtomo-site-archive are comparing it to the libraries listed below
Sorting:
- a tool for using surfaces to explore volumetric data in napari☆19Feb 25, 2026Updated last week
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Dec 1, 2025Updated 3 months ago
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆17Jan 30, 2025Updated last year
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Nov 25, 2025Updated 3 months ago
- ☆10Feb 19, 2026Updated 2 weeks ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated last month
- Cryo-EM micrograph segmentation through deep learning☆22Oct 10, 2025Updated 5 months ago
- Conventions for 3DEM software packages☆19Feb 22, 2022Updated 4 years ago
- GPU-accelerated template matching for cryo-ET☆52Mar 3, 2026Updated last week
- ☆19Dec 22, 2025Updated 2 months ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 2 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 7 months ago
- Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2…☆19Jan 13, 2023Updated 3 years ago
- membrane segmentation in 3D for cryo-ET☆86Feb 27, 2026Updated last week
- Miscellaneous scripts for processing cryo-ET data☆21Feb 25, 2025Updated last year
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 2 years ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆33Feb 28, 2026Updated last week
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆42Apr 11, 2023Updated 2 years ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 7 months ago
- A Docker-based distribution of Appion-Protomo.☆11Oct 23, 2020Updated 5 years ago
- ☆66Feb 8, 2026Updated last month
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated last year
- ☆19Jan 23, 2026Updated last month
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 8 months ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- scripts to monitor cryo-em jobs☆10Sep 29, 2021Updated 4 years ago
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- A possible schema for cryoET geometry metadata☆11Aug 11, 2025Updated 6 months ago
- Two-Dimensional Template Matching implemented in Python☆14Feb 20, 2026Updated 2 weeks ago
- structural heterogeneity analysis for cryo-ET subtomogram☆10Feb 23, 2026Updated 2 weeks ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Mar 11, 2025Updated 11 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆21Feb 3, 2026Updated last month
- Sparse Fourier Backpropagation in Cryo-EM Reconstruction☆12Dec 3, 2023Updated 2 years ago
- A PyTorch-Lightning based deep learning framework.☆11Dec 2, 2025Updated 3 months ago
- A CTF Simulation Web App☆13Aug 6, 2025Updated 7 months ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Updated this week
- ☆25Feb 26, 2026Updated last week
- ☆37Updated this week