Miscellaneous scripts for processing cryo-ET data
☆22Feb 25, 2025Updated last year
Alternatives and similar repositories for cryoet-scripts
Users that are interested in cryoet-scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- A CLI tool to segment the lamella slab in cryo-ET volumes☆14Oct 21, 2024Updated last year
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Live processing and real time reconstruction of cryo☆54May 11, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Apr 13, 2026Updated last month
- a tool for using surfaces to explore volumetric data in napari☆18Feb 25, 2026Updated 2 months ago
- ☆24Apr 6, 2026Updated last month
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 10 months ago
- A CTF Simulation Web App☆13May 11, 2026Updated last week
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated last month
- Scripts to make cryo-electron tomography a bit easier☆15May 14, 2026Updated last week
- ☆75May 8, 2026Updated last week
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 3 years ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆38Updated this week
- ☆38Jun 22, 2023Updated 2 years ago
- ☆23Nov 15, 2025Updated 6 months ago
- Python scripts for easy RELION STAR file manipulation.☆26Mar 24, 2026Updated last month
- GPU-accelerated template matching for cryo-ET☆59Apr 14, 2026Updated last month
- ☆18Updated this week
- ☆26May 7, 2026Updated 2 weeks ago
- ☆16Feb 4, 2017Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆21Mar 12, 2026Updated 2 months ago
- New program to follow Relion projects in a browser!☆48Jan 5, 2026Updated 4 months ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆33Mar 16, 2026Updated 2 months ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 9 months ago
- membrane segmentation in 3D for cryo-ET☆90Feb 27, 2026Updated 2 months ago
- Graphical user interface to integrate cryoEM flexibility analyses with ChimeraX☆24Sep 5, 2024Updated last year
- ☆55Aug 19, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 7 months ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Updated this week
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 4 months ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 3 years ago
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 2 years ago