Miscellaneous scripts for processing cryo-ET data
☆23Jul 29, 2026Updated 3 months ago
Alternatives and similar repositories for cryoet-scripts
Users that are interested in cryoet-scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Sep 9, 2024Updated 2 years ago
- cryo-ET workflow☆11Oct 23, 2026Updated last week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆33Oct 23, 2026Updated last week
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆23Jul 28, 2023Updated 3 years ago
- An implementation of Noise2Noise for cryoET data☆13Apr 9, 2026Updated 6 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆30Oct 20, 2026Updated last week
- GPU-accelerated template matching for cryo-ET☆65Sep 30, 2026Updated last month
- Contextual Analysis Tools for cryoET and subtomogram averaging☆42Oct 23, 2026Updated last week
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆30Jun 29, 2025Updated last year
- ☆87Oct 21, 2026Updated last week
- Cellular content mining and particle localization☆10Sep 21, 2025Updated last year
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 4 months ago
- Scripts to make cryo-electron tomography a bit easier☆15Oct 5, 2026Updated 3 weeks ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆37Sep 15, 2026Updated last month
- IsoNet at higher resolution☆40Updated this week
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 3 years ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Jul 27, 2026Updated 3 months ago
- A CTF Simulation Web App☆13May 11, 2026Updated 5 months ago
- Prompt-based segmentation and fine-tuning for data-efficient and flexible particle picking in cryo-ET tomograms☆14Mar 30, 2026Updated 7 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆23Mar 12, 2026Updated 7 months ago
- Live processing and real time reconstruction of cryo☆61Oct 5, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 7 months ago
- PyTom software for cryo-tomogram processing☆46Jan 5, 2026Updated 9 months ago
- Python scripts for easy RELION STAR file manipulation.☆28Mar 24, 2026Updated 7 months ago
- ☆37Jun 22, 2023Updated 3 years ago
- ☆47Oct 20, 2026Updated last week
- ☆28Oct 16, 2026Updated 2 weeks ago
- ☆16Oct 5, 2026Updated 3 weeks ago
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated last year
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- PIP package of cryoCARE☆46Apr 2, 2024Updated 2 years ago
- membrane segmentation in 3D for cryo-ET☆95Jul 20, 2026Updated 3 months ago
- Rapidly simulate realistic cryo-EM particles☆19May 18, 2023Updated 3 years ago
- ☆57Aug 19, 2024Updated 2 years ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆47Jun 16, 2026Updated 4 months ago
- ☆19Updated this week
- Particle annotations for the large-scale cryo-ET dataset of Chlamydomonas reinhardtii☆14Dec 22, 2025Updated 10 months ago