anmartinezs / pyseg_systemLinks
De novo analysis for cryo-electron tomography
☆24Updated last year
Alternatives and similar repositories for pyseg_system
Users that are interested in pyseg_system are comparing it to the libraries listed below
Sorting:
- cryo-EM tomogram simulator☆29Updated last week
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆39Updated last year
- PIP package of cryoCARE☆45Updated last year
- automated on-the-fly tilt-series alignment☆11Updated 4 years ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Updated 6 months ago
- ☆19Updated last month
- SerialEM mdoc files as pandas dataframes☆14Updated 6 months ago
- ☆25Updated last month
- ☆52Updated last year
- ☆12Updated 2 years ago
- cryolo documentation☆11Updated last year
- ☆34Updated 2 years ago
- Self-supervised deep learning framework for CryoET analysis☆18Updated last week
- cryo-ET particle picking by representation and metric learning☆41Updated last month
- GPU-accelerated template matching for cryo-ET☆48Updated last week
- Contextual Analysis Tools for cryoET and subtomogram averaging☆33Updated last month
- PyTom software for cryo-tomogram processing☆44Updated 2 weeks ago
- ☆10Updated 2 weeks ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆56Updated 3 months ago
- Complementary tools for Relion tomo☆11Updated last year
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆20Updated 2 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Updated 5 months ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated 6 months ago
- 3D-CTF correction for cryo-electron tomography☆28Updated 7 years ago
- IMOD model files as pandas dataframes in Python☆11Updated 6 months ago
- Generates synthetic datasets for Cryo-Electron Tomography☆31Updated 5 months ago
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 10 months ago
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Updated 9 years ago
- ☆60Updated this week
- A CNN for denoising cryo-EM images☆13Updated 6 years ago