anmartinezs / pyseg_systemLinks
De novo analysis for cryo-electron tomography
☆22Updated 9 months ago
Alternatives and similar repositories for pyseg_system
Users that are interested in pyseg_system are comparing it to the libraries listed below
Sorting:
- cryo-EM tomogram simulator☆29Updated this week
- PIP package of cryoCARE☆35Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆37Updated last year
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆30Updated 3 weeks ago
- automated on-the-fly tilt-series alignment☆10Updated 4 years ago
- PyTom software for cryo-tomogram processing☆42Updated 3 months ago
- cryo-ET particle picking by representation and metric learning☆36Updated last month
- ☆32Updated 2 years ago
- ☆19Updated 5 months ago
- cryolo documentation☆10Updated last year
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆17Updated last month
- Generates synthetic datasets for Cryo-Electron Tomography☆29Updated last week
- ☆20Updated 2 months ago
- Parallel cryo electron tomography via beam image shift☆35Updated last month
- ☆48Updated 11 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆36Updated this week
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆51Updated 2 months ago
- GPU-accelerated template matching for cryo-ET☆45Updated this week
- SerialEM mdoc files as pandas dataframes☆13Updated 2 weeks ago
- A CNN for denoising cryo-EM images☆13Updated 5 years ago
- ☆10Updated 2 weeks ago
- ☆12Updated 2 years ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated last month
- ☆54Updated 3 weeks ago
- Cryo-EM micrograph segmentation through deep learning☆22Updated 2 months ago
- ☆14Updated last month
- STAR file I/O in Python☆51Updated 2 months ago
- Conventions for 3DEM software packages☆19Updated 3 years ago
- IMOD model files as pandas dataframes in Python☆11Updated last month
- Jupyter-based tool for membrane segmentation manipulation☆9Updated last month