anmartinezs / pyseg_systemLinks
De novo analysis for cryo-electron tomography
☆22Updated 11 months ago
Alternatives and similar repositories for pyseg_system
Users that are interested in pyseg_system are comparing it to the libraries listed below
Sorting:
- cryo-EM tomogram simulator☆29Updated this week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Updated 2 months ago
- PIP package of cryoCARE☆38Updated last year
- automated on-the-fly tilt-series alignment☆10Updated 4 years ago
- SerialEM mdoc files as pandas dataframes☆13Updated 2 months ago
- ☆23Updated last week
- ☆10Updated last month
- ☆19Updated 7 months ago
- ☆49Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆38Updated last year
- GPU-accelerated template matching for cryo-ET☆46Updated last week
- IMOD model files as pandas dataframes in Python☆11Updated 3 months ago
- ☆12Updated 2 years ago
- cryolo documentation☆10Updated last year
- STAR file I/O in Python☆51Updated last month
- Generates synthetic datasets for Cryo-Electron Tomography☆29Updated last month
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆51Updated last week
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 4 months ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated 3 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Updated 2 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆18Updated last month
- cryo-ET particle picking by representation and metric learning☆39Updated last month
- Conventions for 3DEM software packages☆19Updated 3 years ago
- Complementary tools for Relion tomo☆11Updated last year
- PyTom software for cryo-tomogram processing☆44Updated 5 months ago
- Parallel cryo electron tomography via beam image shift☆36Updated this week
- Contextual Analysis Tools for cryoET and subtomogram averaging☆31Updated last week
- A CTF Simulation Web App☆12Updated 2 months ago
- ☆33Updated 2 years ago
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 7 months ago