Alternatives and similar repositories for MemBrain

Users that are interested in MemBrain are comparing it to the libraries listed below

• teamtomo / membrain-seg
  membrane segmentation in 3D for cryo-ET
  ☆81Updated this week
• carsonpurnell / cryotomosim_CTS
  cryo-EM tomogram simulator
  ☆29Updated last week
• juglab / cryoCARE_pip
  PIP package of cryoCARE
  ☆38Updated last year
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆27Updated last week
• czimaginginstitute / AreTomo2
  ☆49Updated last year
• warpem / warp
  ☆57Updated 3 weeks ago
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆24Updated 11 months ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆25Updated 7 months ago
• ZauggGroup / DeePiCt
  Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…
  ☆38Updated last year
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆44Updated 6 months ago
• MPI-Dortmund / tomotwin-cryoet
  cryo-ET particle picking by representation and metric learning
  ☆40Updated 2 months ago
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆35Updated 3 years ago
• KudryashevLab / TomoBEAR
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆28Updated 4 months ago
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆19Updated last year
• czimaginginstitute / AreTomo3
  Live processing and real time reconstruction of cryo
  ☆37Updated 3 months ago
• czimaginginstitute / MotionCor3
  Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography
  ☆52Updated 3 weeks ago
• wan-lab-vanderbilt / STOPGAP
  STOPGAP is a MATLAB-based package for subtomogram averaging.
  ☆38Updated 2 months ago
• IsoNet-cryoET / IsoNet
  Self-supervised learning for isotropic cryoET reconstruction
  ☆86Updated 10 months ago
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆13Updated 3 months ago
• eisfabian / PACEtomo
  Parallel cryo electron tomography via beam image shift
  ☆38Updated last week
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆31Updated 3 months ago
• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆19Updated 5 months ago
• logicvay2010 / TomoNet
  TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing
  ☆20Updated last month
• SBC-Utrecht / pytom-match-pick
  GPU-accelerated template matching for cryo-ET
  ☆48Updated 3 weeks ago
• builab / subtomo2Chimera
  ☆19Updated last week
• anmartinezs / polnet
  Generates synthetic datasets for Cryo-Electron Tomography
  ☆29Updated 2 months ago
• tomotools / tomotools
  Scripts to make cryo-electron tomography a bit easier
  ☆13Updated 3 months ago
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated 5 months ago
• teamtomo / imodmodel
  IMOD model files as pandas dataframes in Python
  ☆11Updated 4 months ago
• alisterburt / autoalign_dynamo
  automated on-the-fly tilt-series alignment
  ☆11Updated 4 years ago