SerialEM mdoc files as pandas dataframes
☆14Feb 4, 2026Updated 2 months ago
Alternatives and similar repositories for mdocfile
Users that are interested in mdocfile are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- IMOD model files as pandas dataframes in Python☆12Jun 26, 2025Updated 9 months ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- scripts to monitor cryo-em jobs☆10Sep 29, 2021Updated 4 years ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated last year
- Two-Dimensional Template Matching implemented in Python☆16Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- STAR file I/O in Python☆56Nov 24, 2025Updated 4 months ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- SmartScope is a framework for systematic evaluation of cryo-EM specimens☆17Feb 24, 2026Updated last month
- ☆68Feb 8, 2026Updated 2 months ago
- ☆12Apr 4, 2023Updated 3 years ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Apr 2, 2026Updated last week
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- ☆10Mar 29, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆24Apr 6, 2026Updated last week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 8 months ago
- Python scripts for easy RELION STAR file manipulation.☆26Mar 24, 2026Updated 3 weeks ago
- Smart Parallel Automated Cryo Electron tomography☆24Apr 3, 2026Updated last week
- Python module to read/write SerialEM navigator files.☆12Jan 17, 2023Updated 3 years ago
- Parallel cryo electron tomography via beam image shift☆42Apr 4, 2026Updated last week
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Updated this week
- structural heterogeneity analysis and reconstruction for cryo-ET subtomogram☆10Apr 4, 2026Updated last week
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago
- PIP package of cryoCARE☆47Apr 2, 2024Updated 2 years ago
- CryoET Data Portal☆27Updated this week
- ☆19Feb 3, 2025Updated last year
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 9 months ago
- ☆55Aug 19, 2024Updated last year
- ☆19Jan 23, 2026Updated 2 months ago
- A collaborative knowledge sharing platform for the cryo-ET community☆20Aug 7, 2024Updated last year
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Mar 11, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 6 months ago
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated 2 months ago
- De novo analysis for cryo-electron tomography☆25Nov 8, 2024Updated last year
- ☆16Feb 4, 2017Updated 9 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago