brisvag / blikLinks
Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
☆28Updated last month
Alternatives and similar repositories for blik
Users that are interested in blik are comparing it to the libraries listed below
Sorting:
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 8 months ago
- SerialEM mdoc files as pandas dataframes☆13Updated 4 months ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆27Updated last month
- cryo-EM tomogram simulator☆29Updated this week
- ☆49Updated last year
- a tool for using surfaces to explore volumetric data in napari☆19Updated 6 months ago
- ☆33Updated 2 years ago
- PIP package of cryoCARE☆40Updated last year
- IMOD model files as pandas dataframes in Python☆11Updated 4 months ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆19Updated last year
- GPU-accelerated template matching for cryo-ET☆48Updated last month
- automated on-the-fly tilt-series alignment☆11Updated 4 years ago
- ☆22Updated last month
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆39Updated last year
- Contextual Analysis Tools for cryoET and subtomogram averaging☆33Updated 2 weeks ago
- Transformer And Rapid Dimensionless Instance Segmentation☆18Updated last month
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated 4 months ago
- membrane segmentation in 3D for cryo-ET☆82Updated 3 weeks ago
- Live processing and real time reconstruction of cryo☆41Updated 4 months ago
- PyTom software for cryo-tomogram processing☆44Updated 7 months ago
- Parallel cryo electron tomography via beam image shift☆39Updated last month
- ☆19Updated last week
- ☆10Updated 2 weeks ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Updated 4 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Updated 3 months ago
- Miscellaneous scripts for processing cryo-ET data☆18Updated 8 months ago
- Scripts to make cryo-electron tomography a bit easier☆14Updated 3 months ago
- ☆58Updated 3 weeks ago
- Self-supervised deep learning framework for CryoET analysis☆17Updated last week
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆20Updated this week