brisvag / blikLinks
Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
☆28Updated last week
Alternatives and similar repositories for blik
Users that are interested in blik are comparing it to the libraries listed below
Sorting:
- GPU-accelerated template matching for cryo-ET☆48Updated last week
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 9 months ago
- cryo-EM tomogram simulator☆29Updated this week
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆28Updated last month
- ☆33Updated 2 years ago
- PIP package of cryoCARE☆42Updated last year
- ☆50Updated last year
- PyTom software for cryo-tomogram processing☆44Updated 7 months ago
- Live processing and real time reconstruction of cryo☆44Updated 4 months ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆19Updated last year
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated 5 months ago
- a tool for using surfaces to explore volumetric data in napari☆19Updated 7 months ago
- A curated list of awesome computational cryo-ET methods.☆65Updated 2 weeks ago
- membrane segmentation in 3D for cryo-ET☆84Updated 3 weeks ago
- cryo-ET particle picking by representation and metric learning☆40Updated 2 weeks ago
- Two-Dimensional Template Matching implemented in Python☆12Updated last week
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆20Updated 3 weeks ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆39Updated last year
- ☆59Updated last week
- ☆23Updated last week
- Contextual Analysis Tools for cryoET and subtomogram averaging☆33Updated last week
- ☆14Updated last month
- SerialEM mdoc files as pandas dataframes☆14Updated 4 months ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆54Updated 2 months ago
- automated on-the-fly tilt-series alignment☆11Updated 4 years ago
- IMOD model files as pandas dataframes in Python☆11Updated 5 months ago
- Parallel cryo electron tomography via beam image shift☆39Updated this week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Updated 4 months ago
- cryolo documentation☆11Updated last year
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 6 months ago