MLI-lab / DeepDeWedge
Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms
☆33Updated 2 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for DeepDeWedge
- Generates synthetic datasets for Cryo-Electron Tomography☆20Updated 2 weeks ago
- A curated list of awesome computational cryo-ET methods.☆39Updated last month
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆22Updated last week
- ☆16Updated last month
- Self-supervised learning for isotropic cryoET reconstruction☆73Updated 2 weeks ago
- membrane segmentation in 3D for cryo-ET☆58Updated 2 months ago
- ☆43Updated 3 months ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆16Updated 2 months ago
- cryo-ET particle picking by representation and metric learning☆32Updated last month
- cryo-EM tomogram simulator☆20Updated this week
- PIP package of cryoCARE☆27Updated 7 months ago
- GPU-accelerated template matching for cryo-ET☆29Updated this week
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆22Updated 5 months ago
- A collaborative knowledge sharing platform for the cryo-ET community☆20Updated 3 months ago
- ☆40Updated this week
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆17Updated 7 years ago
- PyTom software for cryo-tomogram processing☆33Updated 3 months ago
- Live processing and real time reconstruction of cryo☆15Updated 2 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆30Updated 3 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆19Updated 2 weeks ago
- Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning☆20Updated 2 weeks ago
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆16Updated 3 weeks ago
- Rapidly simulate realistic cryo-EM particles☆13Updated last year
- STAR file I/O in Python☆46Updated this week
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆43Updated last month
- ☆16Updated 3 weeks ago
- Smart Parallel Automated Cryo Electron tomography☆18Updated this week
- A CTF Simulation Web App☆10Updated last week
- ☆11Updated last year
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆27Updated 8 months ago