MLI-lab/DeepDeWedge external links

---

GitHub - View repository

GitHub.dev - Open in online code editor

Star history - Growth chart over time

deps.dev - Dependencies and security vulnerabilities

Gitingest - Export source code for LLM usage

Repomix - Export source code for LLM usage

uithub - Export source code for LLM usage

Close

MLI-lab/DeepDeWedge

Readme badge preview -

If you own this repo, copy the snippet below and add it to your README.md

---

Copy

[![RelatedRepos](https://img.shields.io/badge/related-repos-yellow)](https://relatedrepos.com/gh/MLI-lab/DeepDeWedge)

Close

MLI-lab / DeepDeWedgeView on GitHubMore

• External links
• Readme badge

Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms

☆49Jul 29, 2025Updated 7 months ago

Alternatives and similar repositories for DeepDeWedge

Users that are interested in DeepDeWedge are comparing it to the libraries listed below

• czimaginginstitute / AreTomo3

  View on GitHub
  Live processing and real time reconstruction of cryo
  ☆48Feb 9, 2026Updated 2 weeks ago
• KudryashevLab / TomoBEAR

  View on GitHub
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆29Jun 29, 2025Updated 8 months ago
• czimaginginstitute / AreTomo2

  View on GitHub
  ☆53Aug 19, 2024Updated last year
• EuanPyle / dynamo2relion

  View on GitHub
  Converts Dynamo tables to star files for coordinate import into RELION 4.0
  ☆13Jul 25, 2023Updated 2 years ago
• juglab / cryoCARE_T2T

  View on GitHub
  Singularity image for cryo-CARE
  ☆37Jan 7, 2022Updated 4 years ago
• frosinastojanovska / cryosiam

  View on GitHub
  Self-supervised deep learning framework for CryoET analysis
  ☆20Feb 18, 2026Updated last week
• carsonpurnell / cryotomosim_CTS

  View on GitHub
  cryo-EM tomogram simulator
  ☆30Feb 18, 2026Updated last week
• alncat / opusTomo

  View on GitHub
  structural heterogeneity analysis for cryo-ET subtomogram
  ☆10Feb 23, 2026Updated last week
• Zhang-hn1125 / REST

  View on GitHub
  ☆17Oct 21, 2024Updated last year
• warpem / warp

  View on GitHub
  ☆66Feb 8, 2026Updated 3 weeks ago
• IsoNet-cryoET / IsoNet

  View on GitHub
  Self-supervised learning for isotropic cryoET reconstruction
  ☆90Dec 29, 2024Updated last year
• cbmi-group / DeepETPicker

  View on GitHub
  ☆36Aug 7, 2024Updated last year
• swing-research / Implicit-Cryo-Electron-Tomography

  View on GitHub
  ☆13May 22, 2025Updated 9 months ago
• thomasfrosio / emClarity-tutorial

  View on GitHub
  ☆12Apr 4, 2023Updated 2 years ago
• CellArchLab / MemBrain

  View on GitHub
  ☆36Jun 22, 2023Updated 2 years ago
• wan-lab-vanderbilt / TOMOMAN

  View on GitHub
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆20Jan 23, 2026Updated last month
• anmartinezs / polnet

  View on GitHub
  Generates synthetic datasets for Cryo-Electron Tomography
  ☆34Updated this week
• SBC-Utrecht / pytom-match-pick

  View on GitHub
  GPU-accelerated template matching for cryo-ET
  ☆51Updated this week
• swing-research / CryoLithe

  View on GitHub
  ☆19Updated this week
• nextpyp / pyp

  View on GitHub
  Cryo-EM/ET image analysis
  ☆12Sep 19, 2025Updated 5 months ago
• nextpyp / cet_pick

  View on GitHub
  Cellular content mining and particle localization
  ☆10Sep 21, 2025Updated 5 months ago
• joton / reliontomotools

  View on GitHub
  Complementary tools for Relion tomo
  ☆12Mar 9, 2024Updated last year
• wan-lab-vanderbilt / STOPGAP

  View on GitHub
  STOPGAP is a MATLAB-based package for subtomogram averaging.
  ☆38Aug 6, 2025Updated 6 months ago
• juglab / cryoCARE_pip

  View on GitHub
  PIP package of cryoCARE
  ☆46Apr 2, 2024Updated last year
• alisterburt / dynamo2m

  View on GitHub
  a bidirectional interface between Dynamo and the Warp-RELION-M pipeline
  ☆19Jul 28, 2023Updated 2 years ago
• teamtomo / fidder

  View on GitHub
  Detect and erase gold fiducials in cryo-EM images
  ☆15May 27, 2025Updated 9 months ago
• MPI-Dortmund / tomotwin-cryoet

  View on GitHub
  cryo-ET particle picking by representation and metric learning
  ☆42Nov 24, 2025Updated 3 months ago
• turonova / cryoCAT

  View on GitHub
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆34Feb 10, 2026Updated 2 weeks ago
• teamtomo / membrain-seg

  View on GitHub
  membrane segmentation in 3D for cryo-ET
  ☆86Nov 19, 2025Updated 3 months ago
• czimaginginstitute / MotionCor3

  View on GitHub
  Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography
  ☆58Oct 3, 2025Updated 4 months ago
• anmartinezs / pyseg_system

  View on GitHub
  De novo analysis for cryo-electron tomography
  ☆25Nov 8, 2024Updated last year
• czimaginginstitute / GCtfFind

  View on GitHub
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆25Feb 9, 2026Updated 2 weeks ago
• SBC-Utrecht / PyTom

  View on GitHub
  PyTom software for cryo-tomogram processing
  ☆44Jan 5, 2026Updated last month
• KosinskiLab / pyTME

  View on GitHub
  ☆26Oct 10, 2025Updated 4 months ago
• CellArchLab / cryoet-scripts

  View on GitHub
  Miscellaneous scripts for processing cryo-ET data
  ☆21Feb 25, 2025Updated last year
• bpowell122 / cryoSRPNT

  View on GitHub
  Rapidly simulate realistic cryo-EM particles
  ☆18May 18, 2023Updated 2 years ago
• YangLab-SDU / CryoAtom

  View on GitHub
  From cryo-EM density map to atomic structure
  ☆23Feb 7, 2026Updated 3 weeks ago
• alncat / opusDSD

  View on GitHub
  deep structural disentanglement
  ☆42Updated this week
• brisvag / stemia

  View on GitHub
  Scripts and Tools for Electron Microscopy Image Analysis.
  ☆11Nov 25, 2025Updated 3 months ago