A CLI tool to segment the lamella slab in cryo-ET volumes
☆16Jul 6, 2026Updated 2 weeks ago
Alternatives and similar repositories for slabify-et
Users that are interested in slabify-et are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Live processing and real time reconstruction of cryo☆58May 11, 2026Updated 2 months ago
- ☆19Mar 20, 2026Updated 4 months ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- IsoNet at higher resolution☆37Jun 25, 2026Updated 3 weeks ago
- GPU-accelerated template matching for cryo-ET☆63Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scripts to make cryo-electron tomography a bit easier☆15Updated this week
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆32Jun 23, 2026Updated 3 weeks ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated 11 months ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jun 2, 2026Updated last month
- Detect and erase gold fiducials in cryo-EM images☆16May 27, 2025Updated last year
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- ☆27Jun 29, 2026Updated 3 weeks ago
- Generates synthetic datasets for Cryo-Electron Tomography☆37Jul 14, 2026Updated last week
- ☆80Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆15Jun 1, 2026Updated last month
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆17Mar 4, 2023Updated 3 years ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 3 months ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated last month
- ☆40Updated this week
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆35Jul 9, 2026Updated last week
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Jun 5, 2026Updated last month
- ☆38Jun 22, 2023Updated 3 years ago
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17Jun 23, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Image processing for cryo-electron microscopy in PyTorch☆13Apr 5, 2025Updated last year
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 3 months ago
- A possible schema for cryoET geometry metadata☆12Aug 11, 2025Updated 11 months ago
- Rapid Cryo-ET Reconstruction via Transform-Localized Deep Learning☆21Jun 29, 2026Updated 3 weeks ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆22Mar 12, 2026Updated 4 months ago
- learns to improve tilt-series alignment by making it worse☆32Updated this week
- Contextual Analysis Tools for cryoET and subtomogram averaging☆40Updated this week
- cryo-ET workflow☆10Jul 13, 2026Updated last week
- Cryo-EM/ET image analysis☆14Mar 30, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆32Jul 13, 2026Updated last week
- Smart Parallel Automated Cryo Electron tomography☆24Jun 28, 2026Updated 3 weeks ago
- ☆27Updated this week
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- membrane segmentation in 3D for cryo-ET☆93Feb 27, 2026Updated 4 months ago
- ☆23Nov 15, 2025Updated 8 months ago