A CLI tool to segment the lamella slab in cryo-ET volumes
☆16Jul 6, 2026Updated last month
Alternatives and similar repositories for slabify-et
Users that are interested in slabify-et are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to make cryo-electron tomography a bit easier☆15Aug 7, 2026Updated 3 weeks ago
- ☆19Mar 20, 2026Updated 5 months ago
- Live processing and real time reconstruction of cryo☆59Aug 7, 2026Updated 3 weeks ago
- IsoNet at higher resolution☆39Jun 25, 2026Updated 2 months ago
- GPU-accelerated template matching for cryo-ET☆65Aug 5, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆36Updated this week
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated last year
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆21Jun 2, 2026Updated 2 months ago
- Detect and erase gold fiducials in cryo-EM images☆17May 27, 2025Updated last year
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated last month
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆21Jul 28, 2023Updated 3 years ago
- ☆28Jun 29, 2026Updated 2 months ago
- Generates synthetic datasets for Cryo-Electron Tomography☆40Aug 20, 2026Updated last week
- ☆83Aug 19, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Rapid Cryo-ET Reconstruction via Transform-Localized Deep Learning☆21Aug 11, 2026Updated 2 weeks ago
- ☆16Jun 1, 2026Updated 2 months ago
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆18Mar 4, 2023Updated 3 years ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 5 months ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 2 months ago
- Two-Dimensional Template Matching implemented in Python☆16Updated this week
- ☆44Updated this week
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆36Aug 10, 2026Updated 2 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆37Jun 22, 2023Updated 3 years ago
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17Updated this week
- Image processing for cryo-electron microscopy in PyTorch☆13Apr 5, 2025Updated last year
- A possible schema for cryoET geometry metadata☆12Aug 11, 2025Updated last year
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 4 months ago
- learns to improve tilt-series alignment by making it worse☆34Aug 17, 2026Updated last week
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆22Mar 12, 2026Updated 5 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆42Updated this week
- cryo-ET workflow☆11Aug 20, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cryo-EM/ET image analysis☆14Mar 30, 2026Updated 5 months ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆33Jul 13, 2026Updated last month
- Smart Parallel Automated Cryo Electron tomography☆24Jun 28, 2026Updated 2 months ago
- PIP package of cryoCARE☆46Apr 2, 2024Updated 2 years ago
- ☆28Aug 19, 2026Updated last week
- membrane segmentation in 3D for cryo-ET☆94Jul 20, 2026Updated last month
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago