Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
☆36Aug 10, 2026Updated last month
Alternatives and similar repositories for surface_morphometrics
Users that are interested in surface_morphometrics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆18Mar 4, 2023Updated 3 years ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 5 years ago
- ☆19Dec 22, 2025Updated 8 months ago
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated last year
- ☆28Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A possible schema for cryoET geometry metadata☆12Aug 11, 2025Updated last year
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated 2 years ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Sep 1, 2026Updated 2 weeks ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 7 months ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆21Jul 28, 2023Updated 3 years ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆23Mar 12, 2026Updated 6 months ago
- Conventions for 3DEM software packages☆19Feb 22, 2022Updated 4 years ago
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated last month
- PIP package of cryoCARE☆46Apr 2, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- membrane segmentation in 3D for cryo-ET☆94Jul 20, 2026Updated last month
- ☆23Nov 15, 2025Updated 10 months ago
- ☆14Oct 17, 2025Updated 11 months ago
- A CLI tool to segment the lamella slab in cryo-ET volumes☆17Jul 6, 2026Updated 2 months ago
- A collaborative knowledge sharing platform for the cryo-ET community☆19Aug 7, 2024Updated 2 years ago
- Generates synthetic datasets for Cryo-Electron Tomography☆40Aug 20, 2026Updated 3 weeks ago
- ☆85Updated this week
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 3 months ago
- cryo-ET workflow☆11Sep 3, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two…☆14Apr 27, 2020Updated 6 years ago
- ☆37Jun 22, 2023Updated 3 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 5 months ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆19May 8, 2023Updated 3 years ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Jul 27, 2026Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated last month
- ☆45Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A tool to support interactive machine learning for cryoET data☆12Aug 30, 2024Updated 2 years ago
- Self-supervised learning for isotropic cryoET reconstruction☆92Dec 29, 2024Updated last year
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆14Sep 4, 2025Updated last year
- scripts to monitor cryo-em jobs☆10Sep 29, 2021Updated 4 years ago
- cryo-EM tomogram simulator☆34Sep 3, 2026Updated 2 weeks ago
- De novo analysis for cryo-electron tomography☆26Nov 8, 2024Updated last year
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆42Jan 30, 2024Updated 2 years ago