Prompt-based segmentation and fine-tuning for data-efficient and flexible particle picking in cryo-ET tomograms
☆14Mar 30, 2026Updated 7 months ago
Alternatives and similar repositories for ProPicker
Users that are interested in ProPicker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cryo-EM/ET image analysis☆14Mar 30, 2026Updated 7 months ago
- ☆10Mar 3, 2026Updated 8 months ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated last year
- Particle annotations for the large-scale cryo-ET dataset of Chlamydomonas reinhardtii☆14Dec 22, 2025Updated 10 months ago
- ☆11Sep 9, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An implementation of Noise2Noise for cryoET data☆13Apr 9, 2026Updated 7 months ago
- Scaling data analyses in cellular cryoET using comprehensive segmentation.☆14Oct 21, 2026Updated 3 weeks ago
- Search for Protein 3D Coordinates in CryoET Tomograms☆20Oct 7, 2026Updated last month
- cryo-ET workflow☆11Oct 30, 2026Updated last week
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated 3 months ago
- Segment Organelles from Electron Microscopy Datasets with Segment-Anything 2☆22Oct 19, 2026Updated 3 weeks ago
- ☆16Oct 29, 2026Updated last week
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 5 months ago
- segmentation of spherical vesicles in cryo-electron tomography☆13Oct 25, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆42Jan 30, 2024Updated 2 years ago
- IsoNet at higher resolution☆40Updated this week
- GPU-accelerated template matching for cryo-ET☆65Sep 30, 2026Updated last month
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated last year
- The code implementation of CryoETGS method.☆12Jul 1, 2026Updated 4 months ago
- CryoVIT: Efficient Segmentation of Cryo-electron Tomograms with Vision Foundation Models☆12Apr 25, 2026Updated 6 months ago
- Cellular content mining and particle localization☆10Sep 21, 2025Updated last year
- ☆31Oct 20, 2026Updated 3 weeks ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆48Jun 16, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆21Jun 2, 2026Updated 5 months ago
- learns to improve tilt-series alignment by making it worse☆40Nov 4, 2026Updated last week
- ☆87Nov 3, 2026Updated last week
- ☆48Nov 4, 2026Updated last week
- membrane segmentation in 3D for cryo-ET☆95Jul 20, 2026Updated 3 months ago
- Transformer And Rapid Dimensionless Instance Segmentation☆25Oct 15, 2026Updated 3 weeks ago
- modular Python packages for cryo-EM and cryo-ET☆23Updated this week
- cryo-ET particle picking by representation and metric learning☆47Nov 24, 2025Updated 11 months ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Live processing and real time reconstruction of cryo☆61Oct 5, 2026Updated last month
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Generative model for reconstruction of structures from cryoET☆19Nov 6, 2025Updated last year
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆20Mar 4, 2023Updated 3 years ago
- De novo analysis for cryo-electron tomography☆26Nov 8, 2024Updated 2 years ago
- ☆38Aug 7, 2024Updated 2 years ago
- Self-supervised deep learning framework for CryoET analysis☆21Sep 28, 2026Updated last month
Are these results useful?