takatex / protein-secondary-structure-predictionView external linksLinks
PyTorch implementations of protein secondary structure prediction on CB513.
☆16Dec 30, 2018Updated 7 years ago
Alternatives and similar repositories for protein-secondary-structure-prediction
Users that are interested in protein-secondary-structure-prediction are comparing it to the libraries listed below
Sorting:
- CB513 results (world record)☆30Nov 13, 2016Updated 9 years ago
- This repository is for the replication of our published paper "Protein Secondary Structure Prediction Using Cascaded Convolutional and Re…☆13Nov 10, 2017Updated 8 years ago
- ☆26Dec 8, 2022Updated 3 years ago
- 天池蛋白质结构预测大赛 排名3/241☆19Jan 25, 2024Updated 2 years ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Feb 8, 2021Updated 5 years ago
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆36May 21, 2017Updated 8 years ago
- The database and API backend for ZincBind - the database of zinc binding sites☆16Apr 8, 2025Updated 10 months ago
- ☆18Mar 13, 2024Updated last year
- Protein contacts prediction using deep learning models☆78Jul 16, 2019Updated 6 years ago
- LMetalSite: alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learn…☆19Oct 23, 2025Updated 3 months ago
- Official implementation of the paper "SAINT"☆17Mar 12, 2022Updated 3 years ago
- Protein Secondary Structure predictor using Convolutional Neural Networks☆112Dec 9, 2025Updated 2 months ago
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 7 months ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Mar 25, 2019Updated 6 years ago
- Prediction of protein contact map☆20Feb 2, 2021Updated 5 years ago
- A Python workflow to study protein-protein coevolution and interaction☆21Jun 30, 2017Updated 8 years ago
- Implementation of High Quality Protein Q8 Secondary Structure Prediction by Diverse Neural Network Architectures☆22May 9, 2019Updated 6 years ago
- Neural network model for prediction of amino-acid sequence from a protein backbone structure☆25Mar 5, 2025Updated 11 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆27May 26, 2025Updated 8 months ago
- Multitask learning: protein secondary structure prediction, b-values prediction and solvent-accessibility prediction☆24Aug 23, 2018Updated 7 years ago
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- ☆34Dec 15, 2023Updated 2 years ago
- ☆37Aug 28, 2023Updated 2 years ago
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 2 years ago
- Universal framework for physically based computational protein design☆37Aug 19, 2023Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 4 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Lipid identification software for discovery LC-MS/MS☆12Mar 29, 2019Updated 6 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 3 years ago
- ☆10Mar 15, 2022Updated 3 years ago
- DeepAlign: the protein structure analysis toolkit☆41Jan 2, 2020Updated 6 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Feb 23, 2021Updated 4 years ago
- Complete saturation mutagenesis of a protein using ESM☆16Feb 20, 2024Updated last year
- Semi-Supervised Regression☆12Jul 19, 2019Updated 6 years ago
- Variational autoencoder implementation in tensorflow following the classic paper by Kingma and Welling.☆13Jul 12, 2017Updated 8 years ago
- Datasets for Drug Discovery and Development☆10Aug 22, 2020Updated 5 years ago
- A fork of Autodock Vina for DeltaVina scoring function☆10Nov 7, 2016Updated 9 years ago