a pipeline of metabolomics data processing and quality control
☆30Apr 17, 2026Updated 6 months ago
Alternatives and similar repositories for metaboprep
Users that are interested in metaboprep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for genetic epidemiology projects at Univsersity of Bristol☆15Updated this week
- Web-based Workflow for Metabolomics and Proteomics Data Analysis☆19Mar 25, 2026Updated 7 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- R statistical toolbox for metabolomics☆27Apr 1, 2026Updated 6 months ago
- User interface to reanalyze and explore all public data in Metabolomics Public Data☆12Oct 18, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆18Nov 30, 2024Updated last year
- Metabolomics And Dereplication By Two-dimensional Experiments - MADByTE NMR Metabolomics Platform☆13Jul 23, 2025Updated last year
- Statistical and Data Analysis Workshop for Metabolomics☆11Feb 26, 2016Updated 10 years ago
- Helper Functions for LIBD Deconvolution☆11Sep 25, 2026Updated last month
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Oct 19, 2026Updated last week
- asari, metabolomics data preprocessing☆69Updated this week
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jul 28, 2026Updated 3 months ago
- Spatial neighbour-aware transcript cleanup for imaging-based spatial transcriptomics data (Xenium, MERSCOPE, CosMx). XeniumClean removes…☆21Jul 19, 2026Updated 3 months ago
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Understanding metabolism is fundamental in biomedical and plant research and the identification and quantification of thousands of metabo…☆13Oct 21, 2026Updated last week
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆20Updated this week
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 4 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated 2 years ago
- Nextflow-powered MS-DIAL☆15May 30, 2026Updated 5 months ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆19Jul 15, 2022Updated 4 years ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- Example workflows for refine.bio data☆11Jan 14, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- Power/Precision Analysis to Determine Minimum Sample Size and Effect☆10Jun 24, 2022Updated 4 years ago
- CellNet, for cancer☆11Jul 14, 2022Updated 4 years ago
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- A package for comparing cell type abundances between conditions☆12Oct 14, 2026Updated 2 weeks ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- OUKS - Omics Untargeted Key Script☆10Jul 21, 2026Updated 3 months ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆14Mar 14, 2019Updated 7 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Oct 13, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- piano - An R/Bioconductor package for gene set analysis☆14Sep 13, 2022Updated 4 years ago
- An agentic AI assistant designed for scientists, researchers, and students who want to find and understand academic literature without ge…☆21Sep 13, 2026Updated last month
- Traditional Chinese Medicine Data Analysis and Visualization☆20Oct 15, 2026Updated 2 weeks ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated 2 years ago
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆16May 4, 2023Updated 3 years ago
- Basic sensitivity analysis of epidemiological results in R: Moved to codeberg.org/dhaine/episensr☆14Apr 18, 2025Updated last year