chanzuckerberg / czgenepiLinks
☆13Updated 2 months ago
Alternatives and similar repositories for czgenepi
Users that are interested in czgenepi are comparing it to the libraries listed below
Sorting:
- Genomic Assemblies Merger for NGS☆26Updated last year
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Updated 4 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- blast, shmlast☆21Updated 5 years ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Updated 4 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 2 months ago
- H3ABioNet 16S rDNA diverstity analysis package☆19Updated 6 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19Updated last year
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- Pipeline for poreathon☆14Updated 10 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Updated 3 years ago
- DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)☆18Updated 9 years ago
- Systematic ProtEin AnnotatoR☆19Updated last month
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Updated 8 years ago
- A series of tools and pipelines for genotyping MHC / HLA genes and alleles using SMRT Sequencing☆22Updated 9 years ago
- Set of tools for viral metagenomics.☆13Updated 2 weeks ago
- ☆18Updated 8 years ago
- VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false …☆16Updated 3 years ago
- Nanopore read de-multiplexer☆13Updated 5 years ago
- ☆16Updated 6 years ago
- Influenza genome analysis Nextflow workflow☆23Updated last month
- Mapping NCBI Genbank accession to GTDB accession☆13Updated 4 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- Strain resolved metagenome simulator☆13Updated 7 years ago
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Updated 4 years ago
- reference free variant assembly☆34Updated 2 years ago
- run-length BWT tools for genomic sequences☆19Updated 3 years ago
- ☆11Updated last year
- WDL plugin for pytest☆48Updated 2 years ago