Collaborative Open Plant Omics
☆18Aug 1, 2024Updated 2 years ago
Alternatives and similar repositories for COPO
Users that are interested in COPO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- POC Nextflow pipeline to run Illumina DRAGEN software☆14Aug 15, 2025Updated last year
- ☆18Jun 28, 2026Updated 4 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Aug 23, 2023Updated 3 years ago
- Architecture and overarching documentation for o2r microservices☆12Jul 1, 2021Updated 5 years ago
- Java REST API for iRODS☆12Nov 9, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Jan 13, 2015Updated 11 years ago
- Jupyter+DAR compatibility exploration☆12Mar 15, 2022Updated 4 years ago
- Take a sad plot and make it better☆11Feb 13, 2019Updated 7 years ago
- GPU-accelerated DNA barcode classification☆14Jan 2, 2025Updated last year
- Python library for writing clients that use APIs from Dataverse☆33Nov 23, 2021Updated 4 years ago
- QGIS svg icons - Animal silhouettes☆14Nov 17, 2018Updated 7 years ago
- VAriant Mapping and Prediction of antimicrobial resistance☆12Jun 8, 2026Updated 4 months ago
- R package for ecological niche analysis (subniche on CRAN). Refines OMI analysis for realized niche decomposition using marine and enviro…☆11Apr 1, 2026Updated 6 months ago
- DEPRECATED & Materials Moved: This sprint was to focus on brainstorming for the Joint Roadmap for Open Science Tools.☆24Sep 18, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes☆32Oct 11, 2026Updated 2 weeks ago
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 11 months ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 4 years ago
- Calculating market access using raster surfaces of friction or travel time☆12Oct 19, 2026Updated last week
- Assemble the Genome in a Bottle sequencing data☆10Aug 4, 2017Updated 9 years ago
- Fossil calibrations database☆16Sep 18, 2018Updated 8 years ago
- Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)☆12Aug 6, 2023Updated 3 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 11 years ago
- baltic - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. This fork will no longe…☆12Dec 18, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A literature parsing tool that compiles and analyzes publication data☆10Jun 21, 2022Updated 4 years ago
- ☆13Oct 24, 2026Updated last week
- An R package to call oomycete effectors☆11Aug 31, 2023Updated 3 years ago
- Metabolic scanning and annotation of Metagenomes☆10Dec 18, 2025Updated 10 months ago
- Metagenomic Markov Models for Antimicrobial Resistance Characterization - Source code☆11Jun 25, 2019Updated 7 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- Demultiplex Illumina FASTQ files☆10May 23, 2025Updated last year
- Source code for TreeBASE web application and database☆17May 18, 2026Updated 5 months ago
- Material Design Dashboard for Linux System Info. Great for RPi and other linux Distros☆20Apr 24, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Profiler for metagenomics based on NGLess☆14Feb 22, 2024Updated 2 years ago
- Transmission client for legacy NETGEAR ReadyNAS systems on ARM architecture - DUO v2 (RND2000v2) and NV+ v2 (RND4000v2).☆10Mar 30, 2016Updated 10 years ago
- Omics: Angular + Rust☆11Jan 20, 2023Updated 3 years ago
- 'Open to Discussion' is a project aimed at igniting conversations about open science.☆13May 10, 2018Updated 8 years ago
- The MitoGeneExtractor can be used to extract protein coding mitochondrial genes, such as COI and others from short and long read sequenci…☆12Apr 5, 2026Updated 6 months ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago
- Defunct. Use https://github.com/Linuxbrew/docker☆14Jun 24, 2016Updated 10 years ago