schuetzgroup / sdt-pythonLinks
Python library for fluorescence microscopy data anlysis
☆56Updated last month
Alternatives and similar repositories for sdt-python
Users that are interested in sdt-python are comparing it to the libraries listed below
Sorting:
- Utilities for formatting matplotlib figures☆31Updated 7 months ago
- A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.☆91Updated 11 months ago
- Load MATLAB 7.3 .mat files. I.e. load hdf5 into Python datatypes.☆170Updated 4 months ago
- elastic fda python code☆53Updated last week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated this week
- Fast, modular and reproducible generation of publication quality scientific figures and movies with only a few lines of code.☆16Updated 6 months ago
- A Biological Oscillations Analysis Toolkit☆20Updated 2 weeks ago
- A Python package for feature extraction of neural morphologies☆42Updated 3 weeks ago
- DeepTrack2 is a modular Python library for generating, manipulating, and analyzing image data pipelines for machine learning and experime…☆214Updated this week
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- NeuroData's package for exploring and using progressive learning algorithms☆38Updated 6 months ago
- Preconditioned ICA for Real Data☆114Updated last week
- Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.☆18Updated 5 years ago
- Creating figures and animations for multi-channel images with a focus on microscopy.☆78Updated 10 months ago
- Modular and scalable computational imaging in Python with GPU/out-of-core computing.☆138Updated 6 months ago
- Shareable, interactive scientific figures in the cloud☆37Updated last month
- Segmentation of anatomical structures in a common coordinate space☆33Updated this week
- computes most of information functions (joint entropy, conditional, mutual information, total correlation information distance) and deep …