Alternatives and similar repositories for FastCSR:

Users that are interested in FastCSR are comparing it to the libraries listed below

• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆65Updated this week
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆71Updated 2 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆60Updated 2 months ago
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆24Updated last year
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆47Updated 7 months ago
• AICONSlab / SynthSegCSVD
  CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
  ☆12Updated 9 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆48Updated last week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆51Updated last week
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆45Updated 3 weeks ago
• hufsaim / pvsseg
  perivascular space segmentation
  ☆14Updated 2 years ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆47Updated 2 months ago
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆25Updated last month
• EhsanTadayon / choroid-plexus-segmentation
  Segmentation of Choroid Plexus using Gaussian Mixture Model
  ☆13Updated 2 years ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 4 months ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆29Updated 9 months ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆95Updated 6 months ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆37Updated 2 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆67Updated 8 months ago
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆105Updated 3 months ago
• SCAN-NRAD / DL-DiReCT
  DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
  ☆26Updated 5 months ago
• pBFSLab / DeepPrep
  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
  ☆64Updated last month
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆52Updated 3 years ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated 5 months ago
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆12Updated last year
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆23Updated 3 months ago
• treanus / KUL_NIS
  KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.
  ☆18Updated last month
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆26Updated last year