ofgulban / segmentator
3D MRI data exploration and segmentation tool.
☆74Updated last year
Related projects ⓘ
Alternatives and complementary repositories for segmentator
- Tools for MRI mouse brain morphometry☆30Updated 7 years ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆36Updated last month
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆62Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆64Updated 11 months ago
- Processing tools for high-resolution neuroimaging☆63Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆45Updated this week
- Multi-site dMRI harmonization☆46Updated 9 months ago
- DICOM to NIfTI conversion, NIfTI tools☆90Updated 3 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆85Updated last week
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆97Updated 2 months ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 5 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 8 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆44Updated 3 months ago
- Preprocessing of diffusion MRI☆140Updated this week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆89Updated this week
- defacing utility for MRI images☆112Updated 10 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆61Updated this week
- Guide to tutorial materials for ANTs/R☆45Updated 6 years ago
- Scripts to prepare MP2RAGE for Freesurfer☆23Updated last year
- Create realistic digital phantoms in diffusion MRI.☆31Updated last year
- Partial Volume Correction in PET☆54Updated 10 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆41Updated 3 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- Preprocessing of arterial spin labeling (ASL) data☆40Updated this week
- Automated Fiber Quantification☆75Updated 8 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆60Updated 4 months ago
- dMRI based fiber tracking using parallel transport tractography☆18Updated 2 weeks ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆41Updated 11 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆134Updated this week