3D MRI data exploration and segmentation tool.
☆77Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for segmentator
Users that are interested in segmentator are comparing it to the libraries listed below
Sorting:
- Processing tools for high-resolution neuroimaging☆73Dec 18, 2025Updated 2 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆106Updated this week
- VB17 Sequence Protocols. A collection of pdfs of sequence protocols that where used in my publications. Mostly VASO, Multi-echo, SMS, 3D-…☆20Feb 24, 2026Updated last week
- A free & open python tool for population receptive field analysis.☆19Mar 25, 2023Updated 2 years ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆71Feb 13, 2026Updated 2 weeks ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Jul 19, 2022Updated 3 years ago
- Website for the 2021 OHBM Hackathon☆22Oct 18, 2022Updated 3 years ago
- Tools for mesh surface-based operations☆40Mar 3, 2025Updated last year
- How to create fancy GIFs from an MRI brain image☆125Jun 15, 2024Updated last year
- A command-line program for n-dimensional image enhancement and color balancing.☆22Jul 20, 2021Updated 4 years ago
- Development of an fMRI reliability toolbox: fmreli☆13Sep 20, 2023Updated 2 years ago
- An exploration of how to use inter-subject representational similarity analysis (is-RSA) to study individual differences in brain activit…☆20Apr 22, 2020Updated 5 years ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Dec 26, 2022Updated 3 years ago
- Scripts to prepare MP2RAGE for Freesurfer☆34Oct 27, 2023Updated 2 years ago
- Automatic Segmentation of Hippocampal Subfields☆22Feb 20, 2026Updated last week
- Lessons on neuroimaging analysis with Python☆22Jun 20, 2017Updated 8 years ago
- Implementation of the nic_vicorob team for addressing the MICCAI Grand Challenge on 6-month infant brain MRI segmentation iSeg2017☆36Feb 12, 2018Updated 8 years ago
- A python package for the automatic conversion of EEG datasets to the BIDS standard, with a focus on making the most out of metadata.☆11Feb 26, 2026Updated last week
- Self-Tuning Optimized Kalman Filtering (STOK) + DyNet simulation + connectivity metrics☆12Apr 17, 2022Updated 3 years ago
- A lightweight Python library for reading & writing BrainVoyager file formats.☆27Feb 26, 2026Updated last week
- Patch based denoising method, targeting fMRI thermal noise removal.☆25Dec 19, 2025Updated 2 months ago
- The Monte Carlo Diffusion and Collision simulator (MC/DC), is a C++ open-source Diffusion-Weighted Magnetic Resonance Imaging (DW-MRI) Mo…☆26May 9, 2025Updated 9 months ago
- Website and projects for the OHBM Hackathon in Rome 2019☆87Nov 28, 2022Updated 3 years ago
- A general purpose citizen science game template for scientific research☆25Mar 3, 2023Updated 3 years ago
- A permanent online space for the community to meet&matcha, work&watermelon, catch up&coffee.☆22Jan 13, 2026Updated last month
- Automated motion detection using fmriprep confounds☆10May 17, 2021Updated 4 years ago
- Lists with useful resources related to neuroscience, cognition and psychology.☆12Feb 8, 2019Updated 7 years ago
- Simplex space operations for compositional data implemented in Python.☆13Feb 17, 2022Updated 4 years ago
- Docker image of CAT12 (standalone version)☆10May 28, 2025Updated 9 months ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆29Aug 13, 2020Updated 5 years ago
- ☆15Oct 13, 2025Updated 4 months ago
- ☆12Jun 15, 2021Updated 4 years ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆90Feb 26, 2026Updated last week
- a BIDS app for pseudo-anonymization of neuroimaging data☆53Oct 24, 2025Updated 4 months ago
- Code for 2nd edition of fMRI analysis handbook☆32Jul 21, 2021Updated 4 years ago
- A set of general tools.☆15Sep 7, 2025Updated 5 months ago
- JSONio: a MATLAB/Octave JSON library☆10Nov 18, 2023Updated 2 years ago
- Talks and materials for workshops based on the DataLad handbook☆13Feb 24, 2024Updated 2 years ago
- Connectome visualization utility☆50May 5, 2016Updated 9 years ago