Alternatives and similar repositories for surface_tools

Users that are interested in surface_tools are comparing it to the libraries listed below

• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 8 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated last month
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆92Updated last week
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆61Updated 7 months ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆48Updated 2 years ago
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated last month
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• NSBLab / DiCER
  Diffuse Cluster Estimation and Regression. A de-noising tool.
  ☆19Updated 3 years ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• spin-test / spin-test
  This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…
  ☆55Updated 5 years ago
• jdiedrichsen / suit
  Toolbox for the analysis of cerebellar imaging data
  ☆22Updated last year
• frantisekvasa / rotate_parcellation
  Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.
  ☆48Updated 2 years ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆55Updated last year
• PennLINC / qsirecon
  Reconstruction of preprocessed q-space images (dMRI)
  ☆14Updated this week
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆67Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 4 months ago
• mattcieslak / easy_lausanne
  Easy creation of Lausanne2008 atlases
  ☆23Updated 5 years ago
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆111Updated last week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆42Updated 3 years ago
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated this week
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆111Updated last year
• yetianmed / subcortex
  ☆136Updated 4 months ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago