Alternatives and similar repositories for gif_your_nifti

Users that are interested in gif_your_nifti are comparing it to the libraries listed below

• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated this week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆155Updated last week
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 4 months ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated 3 weeks ago
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆108Updated 10 months ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆167Updated this week
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆24Updated 6 months ago
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆36Updated this week
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆127Updated last year
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆249Updated 2 years ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 5 months ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 3 months ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆102Updated 2 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆73Updated 2 weeks ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆58Updated 4 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated last week
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆105Updated last week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆70Updated last week
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated last year
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated 2 years ago
• Jfortin1 / MNITemplate
  MNI152 Template
  ☆48Updated 5 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 11 months ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆237Updated this week
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆75Updated 2 years ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆27Updated 4 months ago
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆31Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated last month