refresh-bio / RADULS

Related projects ⓘ

Alternatives and complementary repositories for RADULS

• jltsiren / bwt-merge
  A tool for merging large BWTs
  ☆26Updated 3 years ago
• kurpicz / pwm
  Parallel Wavelet Tree and Wavelet Matrix Construction
  ☆26Updated last year
• dominikkempa / faster-minuter
  Wavelet tree based on a fixed block boosting technique
  ☆16Updated 3 years ago
• ips4o / ips2ra
  In-place Parallel Super Scalar Radix Sort (IPS²Ra)
  ☆30Updated 8 months ago
• koeppl / stringsheet
  A cheatsheet for most common Stringology tasks
  ☆15Updated 3 years ago
• vicLeva / bqf
  Implementation of a Backpack Quotient Filter
  ☆10Updated 4 months ago
• itomomoti / OnlineRlbwt
  Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.
  ☆14Updated 6 years ago
• nicolaprezza / r-index
  An optimal space run-length Burrows-Wheeler transform full-text index
  ☆58Updated last year
• nicolaprezza / Re-Pair
  A space-efficient compressor based on the Re-Pair grammar
  ☆11Updated 7 years ago
• jltsiren / relative-fm
  Relative data structures based on the BWT
  ☆12Updated 6 years ago
• nicolaprezza / BWTIL
  BWT Text Indexing Library: a set of tools to work with BWT-based text indexes
  ☆25Updated 2 years ago
• gvinciguerra / la_vector
  🔶 Compressed bitvector/container supporting efficient random access and rank queries
  ☆43Updated 2 months ago
• dynatrace-research / set-sketch-paper
  SetSketch: Filling the Gap between MinHash and HyperLogLog
  ☆49Updated 3 years ago
• sacabench / sacabench
  Implementation of the sacabench framework
  ☆15Updated 3 years ago
• ot / emphf
  An efficient external-memory algorithm for the construction of minimal perfect hash functions
  ☆62Updated 5 months ago
• xxsds / DYNAMIC
  Dynamic succinct/compressed data structures
  ☆112Updated 6 months ago
• xxsds / sdsl-lite
  Succinct Data Structure Library 3.0
  ☆86Updated 2 months ago
• drnatebrown / r-index-f
  R-Index-F Library for Pattern Matching
  ☆13Updated 3 months ago
• Poyias / mBonsai
  Compact Tree Representation
  ☆16Updated 7 years ago
• nicolaprezza / lz-rlbwt
  Run-length compressed BWT with LZ77 sampled suffix array
  ☆10Updated 2 years ago
• patflick / psac
  Parallel Suffix Array, LCP Array, and Suffix Tree Construction
  ☆48Updated 5 years ago
• mpetri / FM-Index
  FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…
  ☆103Updated 9 years ago
• tudocomp / tudocomp
  TU DOrtmund lossless COMPression framework
  ☆17Updated 2 months ago
• gmarcais / compact_vector
  Bit packed vector of integral values
  ☆26Updated last year
• felipelouza / gsa-is
  Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]
  ☆24Updated last year
• tobc / dartminhash
  DartMinHash: Fast Sketching for Weighted Sets
  ☆13Updated 3 years ago
• ekg / mmmulti
  memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort
  ☆28Updated 3 years ago
• voutcn / kxsort
  Fast in-place radix sort with STL-like API
  ☆46Updated 7 years ago
• ByteHamster / SicHash
  A (Minimal) Perfect Hash Function based on irregular cuckoo hashing, retrieval, and overloading.
  ☆15Updated this week
• bingmann / cobs
  COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)
  ☆83Updated 9 months ago