Python and ImageJ scripts designed to track single cells and analyze fluorescence
☆15Dec 16, 2021Updated 4 years ago
Alternatives and similar repositories for CellTracking
Users that are interested in CellTracking are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cell tracking using TensorFlow and BayesianTracker☆23Jan 17, 2022Updated 4 years ago
- Algorithm for round cells identification in the brightfield microscopy images.☆21Aug 19, 2023Updated 2 years ago
- Automated cell tracking package for MATLAB☆11Feb 21, 2019Updated 7 years ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆22May 22, 2026Updated last month
- Time Series Analysis and Its Applications, Ed 5☆21May 12, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image☆11Jun 2, 2022Updated 4 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Dec 10, 2017Updated 8 years ago
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Apr 15, 2022Updated 4 years ago
- This project focuses on tracking cancer cell based on Fuhua et al. [1], which used watershed algorithm to segment cells and built a featu…☆39Apr 10, 2019Updated 7 years ago
- Single-cell fluorescence microscopy data analysis☆26Jul 22, 2021Updated 4 years ago
- (Biological) Cell Tracker for Microscopy Image Analysis☆15May 10, 2017Updated 9 years ago
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Jan 11, 2022Updated 4 years ago
- Mutational antigenic profiling of SARS-CoV-2 RBD against human convalescent sera from the HAARVI cohort☆10Mar 3, 2021Updated 5 years ago
- A collection of resources on bioimage analysis and related tools and techniques☆14Apr 28, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A repository for data package representation for cell tracking data☆13Apr 30, 2020Updated 6 years ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Jul 8, 2024Updated last year
- 中央氣象局觀測資料查詢系統資料爬取 http://e-service.cwb.gov.tw/HistoryDataQuery/index.jsp☆10Dec 7, 2022Updated 3 years ago
- Software for segmentation, tracking and analysis of cells in microscope image sequences.☆43Apr 7, 2024Updated 2 years ago
- Lineage Mapper Fiji plugin and MATLAB source code☆19Aug 4, 2022Updated 3 years ago
- ☆27Jun 17, 2025Updated last year
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Jul 16, 2025Updated 11 months ago
- A framework for rapidly detecting and classifying objects and behaviour from motion☆23May 5, 2026Updated last month
- Relates to the article by Lioy, Cournac et al., Cell, 2018 (Functional partitioning of a bacterial chromosome through the interplay of nu…☆11Aug 19, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated 3 weeks ago
- This repository implements the Fast Iterative Method (FIM) for use in python☆13Apr 15, 2024Updated 2 years ago
- Scripts to perform active learning as described in the referenced article.☆13Sep 17, 2025Updated 9 months ago
- LLM App with Web Search for YouTube video 🎥☆33Feb 9, 2025Updated last year
- MethodsJ2☆14May 6, 2022Updated 4 years ago
- PC monitor brightness controller (control the actual monitor's backlight!) supports multi-monitor.☆10Oct 13, 2019Updated 6 years ago
- Pythonic access to National Instruments NI DAQmx hardware☆15Nov 3, 2022Updated 3 years ago
- ☆11Jul 31, 2019Updated 6 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is a repository containing notebooks demonstrating along corresponding with YouTube videos, coding strategies to various problems.☆10Aug 23, 2021Updated 4 years ago
- A minimal package for saving and reading large HDF5-based chunked arrays.☆15Apr 12, 2022Updated 4 years ago
- A collection of LUTs for ImageJ/Fiji☆77Jun 20, 2020Updated 6 years ago
- ☆15Updated this week
- Implementation and analysis of Maximin Affinity of Image Segmentation☆13Jul 14, 2020Updated 5 years ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 4 years ago
- Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy☆55Dec 21, 2020Updated 5 years ago